Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02066 ATGGAGGTACATTCTCCTGTTGTAGCTAAGAGACTATGGAATGTGTTGAGGGTAACCTTCTTCATGATAAGGAAGGGTTTGATCTCAAAGAGAAATATGATCATGGACATGAATTTGATGATGAAGAAAGGGAAGGTGGTGAGAAAATCCCTTAGCAACCTCATGTCATCACATCACCACCACCACCACCACCACCACAAGAACAACCCAAAGAGCGTGACACGTGGCAGCGGCGGTGCCTTAGGGGTGCATTACGAATTCTCTTGCAGCAATAGTCCAAATCCTGTTTTCTTCAACATGCCAAAGCGCAAGCACCATTTCAACTTCCCCTGCATCCATGCCCCTGAGGTTCTCGAAGAGGAAGAAGAACCCGATTTTTCATTCGAAGTTGAAAGTGATATGCCTAAGGATGTTGTTACCGTGCCCAAGACCCCAGAATACATGTACAATTTTATGGTTCCCGGAGAGAAAAAGAGTCCTCTTCTCTCACCGTTCTCCGTGAGGGTGTCCAATTACTCGGCCTTGGACGAAAACGAAGACACTGGAAATGATCATCGTGTTGATGACCAGGCTGAGGATTTCATCAGAAGGTTCTATGAGCAGCTTAGGACGCAAAGCCCCGTGCAGTTCCTGCGTTACCAAGAGATGTAA 651 0.4654 MEVHSPVVAKRLWNVLRVTFFMIRKGLISKRNMIMDMNLMMKKGKVVRKSLSNLMSSHHHHHHHHHKNNPKSVTRGSGGALGVHYEFSCSNSPNPVFFNMPKRKHHFNFPCIHAPEVLEEEEEPDFSFEVESDMPKDVVTVPKTPEYMYNFMVPGEKKSPLLSPFSVRVSNYSALDENEDTGNDHRVDDQAEDFIRRFYEQLRTQSPVQFLRYQEM 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02066 216 Pfam Cotton fibre expressed protein 186 216 IPR008480 -
Pumo5g02066 216 MobiDBLite consensus disorder prediction 55 71 - -
Pumo5g02066 216 MobiDBLite consensus disorder prediction 55 75 - -
Pumo5g02066 216 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 5 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02066 Pumo-Chr5 56992742 56993841 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02066 - - gmx:100806803 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02066 5 56992742 56993841 Pumo5g02066 5 56992742 56993841 ECH