Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02065 ATGAAGAACAGAACATCAAGGTTGCTGAAGCAGATCATAGCAAATCTGAGCTCAATGGCCAAGTCAAAAACCATGGCCTTGAAGTCCAAAACAAACGCCATCAGGGCACGTTTGATCATATTCTCAATGATGAAGAACAAGAAGTTCTTGATGACTTCCCTCTCTGAGAAGTTCCATTCTGTGTGGGGGAACAATTCTCAACCCAAGGAGGATTGCTTCTTGGAAGATGGCAATGACCAAAGCAAGGCCATAGTGGTGTACAACAGCAATGCACACTCCTATGAGGCCTTGCCAAACCCCAGTGAAACCCAAGTGGTGGAGGAGGAACAAGACCAAGATGGCTATGATGATGGTTACTACAATTATGATGGCGATGATGACAAGTACCCTGATCTCACACACACCCTTTTTGATTCTGAGGATTTGGATCTTGGAGGGTCAGTGATTGATTTGGTGAAGAACTCTAAGGAAGAGGCAGGGAAAGAGTTTAAACTGGAGGATGAGATTGACCTTGCTGCTGACCTTTTCATCATGAAGTTCCGGAGGACAATGGTGCTGCAGAAGCAAGAGTCATTGAAGAGGAAGAAGGAAATGGAGCAAGAGGGTGCATGA 612 0.4526 MKNRTSRLLKQIIANLSSMAKSKTMALKSKTNAIRARLIIFSMMKNKKFLMTSLSEKFHSVWGNNSQPKEDCFLEDGNDQSKAIVVYNSNAHSYEALPNPSETQVVEEEQDQDGYDDGYYNYDGDDDKYPDLTHTLFDSEDLDLGGSVIDLVKNSKEEAGKEFKLEDEIDLAADLFIMKFRRTMVLQKQESLKRKKEMEQEGA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02065 203 Pfam Cotton fibre expressed protein 166 198 IPR008480 -
Pumo5g02065 203 PANTHER EMB|CAB67623.1-RELATED 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02065 Pumo-Chr5 56954296 56955571 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02065 - - gmx:100807332 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02065 5 56954296 56955571 Pumo5g02065 5 56954296 56955571 ECH