Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02064 ATGATTGCTCTTATGCTATCACAAGAGTATGCTAAATTGGATGGTGCAGTTAGTAGACGACTTTCTTACTTGGCACCTATTCCCCTTGTACCTCGAATAAACTCGTTCATCCCGAACATGAGTGATGCTAGCATGGATCACCAACGACTTCGTCATAGGTTGAACATTCATGGTCTCTATGAAGTTAAAGTATCTGGAGATGGAAACTGTCAGTTTCGTGCACTTTCAGATCAACTTTTTAGGTCACCTGAGCACCACAAGTATGTTCGAAAAGAGATTGTGAAACAGCTCAAAGATCATCGTTCCTTATATGAATGCTATGTACCAATGAAGTATAAACAATATTACAAGAAAATGGCAAAATTTGGAGAATGGGGGGACCATATTACCTTACAAGCGGCTGCTGATAAGTTTGCAGCAAAGATATGCCTTTTAACATCATTCAAAGACACTTGTTTCATCGAAATTACGCCACTATATCAAGCACCGAAGCGTGAGTTGTGGTTAAGCTTTTGGTCTGAGGTTCACTACAATTCACTATGTGACATTCGAGATACACCAATCCCACATAAACCAAGGAAGAAACACTGGTTGTTCTAG 600 0.3983 MIALMLSQEYAKLDGAVSRRLSYLAPIPLVPRINSFIPNMSDASMDHQRLRHRLNIHGLYEVKVSGDGNCQFRALSDQLFRSPEHHKYVRKEIVKQLKDHRSLYECYVPMKYKQYYKKMAKFGEWGDHITLQAAADKFAAKICLLTSFKDTCFIEITPLYQAPKRELWLSFWSEVHYNSLCDIRDTPIPHKPRKKHWLF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02064 199 FunFam OTU domain-containing protein 41 187 - -
Pumo5g02064 199 Pfam OTU-like cysteine protease 66 156 IPR003323 -
Pumo5g02064 199 SUPERFAMILY Cysteine proteinases 44 184 IPR038765 -
Pumo5g02064 199 Gene3D - 41 189 - -
Pumo5g02064 199 CDD OTU_plant_OTU9-like 50 180 - -
Pumo5g02064 199 ProSiteProfiles OTU domain profile. 59 183 IPR003323 -
Pumo5g02064 199 PANTHER OTU DOMAIN CONTAINING PROTEIN 11 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02064 Pumo-Chr5 56945388 56949860 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02064 - - gmx:100795801 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02064 5 56945388 56949860 Pumo5g02064 5 56945388 56949860 ECH