Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02059 ATGGTGATTAGTCTCTCCCACCTCATATTGCCTTGCAACACTTCTCACTCTTTTCTGGGACTCAAGATGATTCCCCTGTCCCATAACACAGTCTCTGTTCACCGGGGTGGAGTACCTTGTGACCCTCTTCTTCACCCAATTGCGTTGGATCCAATTCCGAATAAGCCTTTTTCTTCTGCCTCTCTGTTTTGGAACTGCAAGAGGAGAAGAAGGAAGAGGAAACACTCTGTTACTATGGCTTCTAATATCAGGACCAACAATTTCCTTCGCCATGTGGAATCAATGAAGCTTATGCCATCAGGTGCTGGCCACATTTCACACCTGAACGCTGTGATACTTGGTGAATCTCTCGCCACTGAAGAGGATGATTTCGTTCTTCCAAGTGAGGACTTTGCTAGCCAAGCCAATGTTCAGTCCCCAGAACAGTATCTGAAGATGTATAAGAGATCGGTTGAGGATCCTGCTGGATTCTGGTCTGAGATTGCCTCAGAGTTCTATTGGAAACAGCGATGGGGTGATAAAGTTTGTGATGAAAATTTTGATGTTAGGAAAGGGAATATCAAGATTGAGTGGTTCAAGGGTGGCATCACCAACATCTGTTATAATTGCTTGGATAGAAATGTTGAAGCTGGACTTGGTGATAAGATAGCCATTTACTGGGAAGGCAATGAGCCTGGTTTGGATGGTACTTTGACATACACTCAGCTTCTACATCAAGTTTGCCAGCTTGCAAACTACCTAAAAGATATTGGTGTGAAGAAGGGAGATGCGGTAATTATTTATTTGCCCATGCTTATGGAGCTTCCCATCGCAATGCTTGCCTGTGCCCGGATTGGTGCCGTTCATTCGGTTGTATTTGCTGGTTTTTCTGCAGAAGCTCTTTCCCAGAGAATCGTTGATTGTAAACCAAAAGTTGTAATTACTTGCAATGCTGTTAAAAGGGGCCCTAAGCCTATCTATCTGAAAGATATTGTTGATGCTGCAATCGATGATTCAGCCCAAAATGGGATCTCTATAGATAAATGCGTAGTTTATGAAAATCAATGGGCAATGAAGAGGGAAGATACCAAATGGAAGGAAGGGCGTGATATATGGTGGCAGGATGTCATTCCTAAATATCCAACTACTTGTCCCGTGGAGTGGGTTGATGCAGAGGATCCACTTTTTCTACTCTATACAAGTGGGAGTACAGGAAAACCTAAGGGTGTCCTCCATACCACTGGTGGTTACATGGTGTACACTGCAACAACATTCAAGTATGCATTTGACTACAAGCCGTCTGACATCTACTGGTGTACCGCTGATTGTGGTTGGATTACTGGGCACAGCTATGTCACTTATGGACCCATGCTCAATGGTGCATCTGTTATTGTGTATGAAGGGGCTCCTAATTATCCTGATGCTGGGAGATGTTGGGAAATTGTTGACAAATATAAGGTGACATTATTCTACACTGCCCCCACATTGGTGCGGTCCCTCATGCGTGATGGTGATGCGTTTGTTACTCGCTACTCAAGGAAATCTTTACGAGTCCTAGGAAGTGTAGGCGAGCCCATAAATCCAAGTGCATGGAGGTGGTTTTACAATGTAGTTGGAGATTCAAGGTGCCCTATCTCTGACACTTGGTGGCAAACAGAAACGGGTGGCTTCATGATAACTCCACTACCAGGTGCTTGGCCCCAGAAACCTGGTTCTGCAACTTTCCCTTTCTTTGGAGTTCAGCCTGTCATAGTGGATGAGAAAGGTGTTGAAATAGAAGGAGAGTGCAGTGGATATTTGTGTGTGAAGAAATCATGGCCTGGGGCATTCAGAACTCTGTATGGTGATCATGAAAGATATGAAACAACATATTTCAAGCCATTTGCCGGATACTATTTCAGTGGTGATGGTTGCAGCAGGGATAAAGATGGATACCATTGGCTCACTGGAAGAGTTGACGATGTCATCAATGTCAGTGGTCATCGAATTGGCACAGCAGAAGTGGAATCAGCTTTAGTTTCACATCCACAATGTGCAGAGGCTGCTGTGGTTGGTGTGGAGCATGAGGTCAAAGGACAGGGTATCTATGCATTTGTTACGGTTGTGGATGGTGTTCCTTACAGTGAAGAACTGCGGAAGGCCCTCATACTCACAGTTCGAAAGCAGATAGGAGCCTTTGCAGCACCTGATAAAATTCATTGGGCACCTGGCCTTCCAAAAACAAGGAGCGGAAAGATAATGCGAAGAATTCTGAGAAAAATTGCTTCCAGGCAGCTGGATGAACTTGGAGATACAAGTACCCTTGCAGATCCAAATGTGGTCAATCAACTTATAGAACTTGCAGATTCTTGA 2331 0.4453 MVISLSHLILPCNTSHSFLGLKMIPLSHNTVSVHRGGVPCDPLLHPIALDPIPNKPFSSASLFWNCKRRRRKRKHSVTMASNIRTNNFLRHVESMKLMPSGAGHISHLNAVILGESLATEEDDFVLPSEDFASQANVQSPEQYLKMYKRSVEDPAGFWSEIASEFYWKQRWGDKVCDENFDVRKGNIKIEWFKGGITNICYNCLDRNVEAGLGDKIAIYWEGNEPGLDGTLTYTQLLHQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSAEALSQRIVDCKPKVVITCNAVKRGPKPIYLKDIVDAAIDDSAQNGISIDKCVVYENQWAMKREDTKWKEGRDIWWQDVIPKYPTTCPVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPMLNGASVIVYEGAPNYPDAGRCWEIVDKYKVTLFYTAPTLVRSLMRDGDAFVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTVVDGVPYSEELRKALILTVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPNVVNQLIELADS 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02059 776 Gene3D - 647 776 IPR045851 -
Pumo5g02059 776 Pfam AMP-binding enzyme 212 651 IPR000873 -
Pumo5g02059 776 Pfam AMP-binding enzyme C-terminal domain 660 738 IPR025110 -
Pumo5g02059 776 FunFam Acetyl-coenzyme A synthetase 647 776 - -
Pumo5g02059 776 FunFam Acetyl-coenzyme A synthetase 124 646 - -
Pumo5g02059 776 Hamap Acetyl-coenzyme A synthetase [acs]. 120 774 IPR011904 GO:0003987|GO:0016208|GO:0019427
Pumo5g02059 776 Pfam Acetyl-coenzyme A synthetase N-terminus 143 203 IPR032387 -
Pumo5g02059 776 ProSitePatterns Putative AMP-binding domain signature. 390 401 IPR020845 -
Pumo5g02059 776 Gene3D - 124 646 IPR042099 -
Pumo5g02059 776 PANTHER ACETYL-COENZYME A SYNTHETASE 127 772 - -
Pumo5g02059 776 SUPERFAMILY Acetyl-CoA synthetase-like 130 771 - -
Pumo5g02059 776 CDD ACS 141 763 - -
Pumo5g02059 776 NCBIfam acetate--CoA ligase 138 772 IPR011904 GO:0003987|GO:0016208|GO:0019427
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02059 Pumo-Chr5 56857584 56866360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02059 85 775 Acyl Lipid Metabolism Gene Families AT5G36880 83.647 0.0 1245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02059 K01895 - gmx:100808939 1496.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02059 5 56857584 56866360 Pumo5g02059 5 56857584 56866360 ECH