Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02053 ATGGCTGGTGGTAGTAGGAATCCTCTTGTTGTTGGGCGTGTTATAGGGGAAGTAATAGACCCATTTGAAAGTTCTATTCCTTTCAGGGTCACCTATGGTAATAGAGAAGTGAGCAATGGTTGTGAGCTTAAACCTTCCCATGTTGCCAACCAACCCAGAGTGAGTGTTGGTGGAGATGACCTCAGGAACTTCTACACTATGGTCATGGTGGATCCTGATGCTCCCAGCCCAAGTAACCCTAATTTCAGGGAGTACCTTCATTGGTTGGTGACTGATATTCCAGAAACTACTGGGGCTACTTTTGGTAACGAGGTTGTAAGCTATGAATGCCCACGACCCACGATGGGGATTCATCGTTTCGTGTTTGTGTTGTTCCGTCAACAGTATCGACAGAGGGTGTATGCTCCTGGATGGCGACAAAATTTCAATACTAGAGAATTTGCTGAACTTTACAACCTTGGATTGCCAGTTGCTGCTGTCTTCTTCAACTGTCAGAGGGAAACTGGCTCTGGTGGTAGGACATTTTGA 528 0.4602 MAGGSRNPLVVGRVIGEVIDPFESSIPFRVTYGNREVSNGCELKPSHVANQPRVSVGGDDLRNFYTMVMVDPDAPSPSNPNFREYLHWLVTDIPETTGATFGNEVVSYECPRPTMGIHRFVFVLFRQQYRQRVYAPGWRQNFNTREFAELYNLGLPVAAVFFNCQRETGSGGRTF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02053 175 SUPERFAMILY PEBP-like 13 167 IPR036610 -
Pumo5g02053 175 CDD PEBP_euk 27 164 IPR035810 -
Pumo5g02053 175 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 12 168 IPR035810 -
Pumo5g02053 175 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Pumo5g02053 175 Gene3D - 3 170 IPR036610 -
Pumo5g02053 175 Pfam Phosphatidylethanolamine-binding protein 52 159 IPR008914 -
Pumo5g02053 175 FunFam Terminal flower 1 2 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02053 Pumo-Chr5 56733109 56735184 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02053 K16223 - gmx:100781509 345.895