Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02048 ATGCTGAAGCGCCCCTCCCGCCAGGAGTCCCTCGCCGACAAGATCTACCGCTTCCGAGGGACGCTGCTCGTCGTCGCGATCCCGCTCCTCCTCATCACCTTCGTCCTCTACGTCATGCCGTCGAGCTCATCTAACGAGTCCGTCGGAGACTACGCCCTCGTCAACCGCAAAATGTCCCCGGAGAAGAAATCCGGCGGCTCCTACGCCGTCATCTTCGACGCCGGCAGCTCCGGCAGCCGCGTCCACGTCTTCCATTTCGATCACAACCTGGATCTCGTCCACATTGGCAAAGATCTCGAGCTTTTCGTCCAGAAAAAACCGGGATTGAGTGCGTTCGCTCAGAATCCGAAACAGGCAGCGGAATCTTTGGTTCCGCTTTTGGAGGAAGCGGAGAGTGTTGTTCCTCGTGAATTGCGATCCAAGACACCGGTTCGAGTTGGGGCAACTGCGGGTTTGAGGGCTTTGGAAGGGGATGCATCGGATAGGATCTTGCAAGCGGTAAGGGATTTGCTTAAGGAAAGGAGTAGCCTGAAATCTGAGACTGATGCAGTTACAGTGCTTGATGGAACACAAGAAGGTGCTTATCAATGGGTTACTATCAACTATCTATTGGGAAACTTGGGAAAAGATTATTCAAAGACCGTTGGGGTAGTTGATCTTGGAGGTGGATCTGTTCAAATGGCTTATGCCATCTCAGAGACAGATGCTGCCATGGCTCCAAAAGTAGCAGATGGAGGGGACCCATATGTCAAGGAGATGTTCCTGAGGGGAAGGAAATACTATCTCTATGTTCACAGTTACTTGCACTATGGTTTACTAGCTGCTCGTGCAGAGATTTTAAAGGTTTCTGAAGATGCTGAAAACCCTTGTATCTTATCTGGCTATGACGGATCCTACAATTATGGAGGAAAGTCGTTTAAGGCTTCATCCTCTGGAGCAAGCTTAAATGAATGCAAAAGTGTTGCTCTTAGGGCTCTCAAAGTTAATGAGTCAACATGTACTCATATGAAGTGTACTTTTGGTGGGATATGGAATGGTGGAGGGGGGGATGGACAGAAGAACCTTTTTGTTGCCTCTTTCTTCTTTGACCGGGCTGCTGAGGCTGGTTTTGCTGATCCAAACTTGCCAGTTGCAATAGTTCGTCCTGCAGATTTTGAGGATGCCGCTAAGCAAGCATGTCAAACAAAACTTGAGAATGCCAAATCCACTTTCCCACATGTTGAAGAAGGGAACCTTCCTTATCTTTGCATGGATCTTATATACCAGTATACGCTGCTTGTTGATGGGTTTGGTAGGTTTTATTTAGATGTTGGAATAACTATAATGACGTTTTCTACAAAGTCTTTATGGTGTTATCTTCCTGCACTCATTGCTTCAATTTGTTGGCAGGCATATATCCATGGCAAGAGATTACATTGGTGA 1422 0.4768 MLKRPSRQESLADKIYRFRGTLLVVAIPLLLITFVLYVMPSSSSNESVGDYALVNRKMSPEKKSGGSYAVIFDAGSSGSRVHVFHFDHNLDLVHIGKDLELFVQKKPGLSAFAQNPKQAAESLVPLLEEAESVVPRELRSKTPVRVGATAGLRALEGDASDRILQAVRDLLKERSSLKSETDAVTVLDGTQEGAYQWVTINYLLGNLGKDYSKTVGVVDLGGGSVQMAYAISETDAAMAPKVADGGDPYVKEMFLRGRKYYLYVHSYLHYGLLAARAEILKVSEDAENPCILSGYDGSYNYGGKSFKASSSGASLNECKSVALRALKVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNLPVAIVRPADFEDAAKQACQTKLENAKSTFPHVEEGNLPYLCMDLIYQYTLLVDGFGRFYLDVGITIMTFSTKSLWCYLPALIASICWQAYIHGKRLHW 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02048 473 Pfam GDA1/CD39 (nucleoside phosphatase) family 65 431 IPR000407 GO:0016787
Pumo5g02048 473 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 12 431 IPR000407 GO:0016787
Pumo5g02048 473 FunFam Apyrase 1 188 442 - -
Pumo5g02048 473 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 187 202 IPR000407 GO:0016787
Pumo5g02048 473 Gene3D - 68 187 - -
Pumo5g02048 473 CDD NBD_sugar-kinase_HSP70_actin 70 229 - -
Pumo5g02048 473 Gene3D Exopolyphosphatase. Domain 2 188 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02048 Pumo-Chr5 56651164 56657792 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02048 7 431 Calmodulin-binding Proteins AT3G04080 70.492 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02048 K14641 - gmx:100786073 817.764