Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02030 ATGGCTGAGGTTTTGACCAAGGCGAGTTTGGTTTCTTCATGGCATGGGGTTAGTCAACGGCATCATCGAAGGGTATCAATGGTTCCCAATACTTGTAGCATCGGTTCTGGCGTGGGAAGGTTCCCTTCTTTGAAGATAAAGTCTCAGATTCTCAGATCTCGGTCCTCTTCTTCTGAGTTTCAGGGTAAAAAGCTTGTCTTTCAAGTAAATAGAGGAATACCCAACAGGGTCAATTCGCGATTGAGAGCTTCAACTGGGGCTCAGATGACCCTTAGATTAGGGAAAGTTCAGAAATGGTGGGAAAAGGGGCTTCAACCCAACATGAAAGAGGTGACTTCGGCACAAGACCTTGTGGATTCACTGTTAAACGCAGGGGAAAAGTTGGTGGTGGTTGATTTCTTCTCTCCTGGTTGTGGTGGCTGCAAAGCCCTTCATCCTAAGATATGTCAATTGGCAGAGATGAATCCTGATGTTCAGTTCCTTCAGGTGAACTATGAGGAGCATAAGTCCATGTGTTATAGCCTTAATGTCCATGTTCTTCCCTTCTTCCGCTTCTATAGAGGTGCTCATGGTCGATTATGTAGCTTTAGCTGCACCAATGCCACGATCAAGAAGTTTAAAGATGCATTGGCCAAACACACCCCAGATAGATGCAGCTTGGGCCCAACCAAAGGGTTAGAGGAGAAAGAGCTCCTAGCTCTTGCTGCCAACAGAGATCTTTCCTTCACCTATTCACCAAAACCATTACAACCTGCACATGCAAATGAAGAGTTGGCAACCGAACCTGCTCCTGCTCCAAGTTCAGAATCTCTTCCTTTACCTTCAATGATCCTCAATTCTGAGGTCTCTAAAGAGAGAACCTTGACCACTTCTGGGAGATGA 882 0.458 MAEVLTKASLVSSWHGVSQRHHRRVSMVPNTCSIGSGVGRFPSLKIKSQILRSRSSSSEFQGKKLVFQVNRGIPNRVNSRLRASTGAQMTLRLGKVQKWWEKGLQPNMKEVTSAQDLVDSLLNAGEKLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPDRCSLGPTKGLEEKELLALAANRDLSFTYSPKPLQPAHANEELATEPAPAPSSESLPLPSMILNSEVSKERTLTTSGR 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02030 293 MobiDBLite consensus disorder prediction 272 293 - -
Pumo5g02030 293 SUPERFAMILY Thioredoxin-like 97 213 IPR036249 -
Pumo5g02030 293 Gene3D Glutaredoxin 101 218 - -
Pumo5g02030 293 MobiDBLite consensus disorder prediction 252 293 - -
Pumo5g02030 293 CDD TRX_family 124 188 - -
Pumo5g02030 293 Pfam Thioredoxin 119 190 IPR013766 -
Pumo5g02030 293 PANTHER THIOREDOXIN, MITOCHONDRIAL 77 246 - -
Pumo5g02030 293 FunFam Thioredoxin-like 1-2, chloroplastic 97 215 - -
Pumo5g02030 293 ProSiteProfiles Thioredoxin domain profile. 75 215 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02030 Pumo-Chr5 56066839 56070096 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02030 - - gmx:100816892 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02030 5 56066839 56070096 Pumo5g02030 5 56066839 56070096 ECH