Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02028 ATGTGTTGGTGTGTGGAAGGGATTGGTGTGAATTGGGGAACTCAAGCAACCCACAAGTTGCCACCAGACACTGTGGTTCAGATGTTGAAGGATAATGGGATTCAGAAAGTGAAGCTTTTTGATGCAGATGACTCCACCATGACTGCTTTGGCTGGGTCTGGGATTGAAGTCATGGTGGCTATCCCTAATAACCAGCTTGCTGAGATGAATGACTATGGCAGGGCCAAACAGTGGGTCAAGAAAAACGTCACACGTTACAACTTCAATGGAGGAGTTAATGTCAAGTATGTAGCAGTTGGGAACGAGCCATTTTTGAAATCCTACAACAATTCATTCTTGAATATCACCTTCCCTGCACTGCAGAACATTCAAAATGCCCTCAATGAAGCAGGTCTTGGAGACAAAGTAAAGGCTACAGTGCCCTTAAATGCTGATGTGTATCAGTCTCCAGAGAATAATCCTGTTCCATCTGCAGGAATATTTAGGCCTGATATCAGTGGTCTCATGACCCAGATAGTGCAATTTCTCAGCAAGAATGGCGCGCCATTTACCGTTAACATTTACCCCTTCTTAAGTCTTTATGGTAACGATGATTTTCCTTTCAACTACGCCTTCTTCGACGGTGTAGACAATCCGATAAACGATAACGGGACTCCATACACCAATGTCTTTGATGCAAATTTTGATACCTTGGTTGCTGCTCTCAAATCAGTGGGGTTTGGGGACCTGCCTATTTTGGTAGGAGAAGTAGGATGGCCAACAGAAGGGGACAAGAATGCCAATGTAGGCAATGCTTTGAGATTCTATAATGGTCTTCTGCCAAGGCTTGCAGCAAATAGAGGCACCCCGCGCCGCCCTGGACACATTGAAGTTTATCTATTCGGACTCATCGATGAGGATGCCAAGAGCATTGCTCCGGGAAACTTCGAGCGCCACTGGGGGATATTCAGATATGATGGACAACCTAAGTTTCCAATGGACCTTTCTGGTCAGAACCAAAACAAATTTCTCATAGGTGCACAGAATGTGAAGTATCTTGCTCCAAGGTGGTGCATGTTTAATCCAGATGCCAAGGATCTCAGCAAACTTCCAGATAATATTAACTATGCTTGCACTTTTGGTGATTGCACTGCACTTGGATATGGTTCTTCTTGCAACAACCTTGATGCTAATGGCAATGCCTCTTATGCATTCAATATGTACTTCCAGGTGCAAAATCAGAACCCCATGGCATGCAATTTTCAAGGTTTGGGCAAGCTTACTACAGACAATATCTCAACACCCACTTGCAATTTTATCATCCAGATAGTTAACTCTTCAGCCTCTTCTTTGATGCCCTCACTTGTTGCTTTCTTGTTTGTTAGCTTATTCATGATTCTGTTTTCTTAG 1389 0.437 MCWCVEGIGVNWGTQATHKLPPDTVVQMLKDNGIQKVKLFDADDSTMTALAGSGIEVMVAIPNNQLAEMNDYGRAKQWVKKNVTRYNFNGGVNVKYVAVGNEPFLKSYNNSFLNITFPALQNIQNALNEAGLGDKVKATVPLNADVYQSPENNPVPSAGIFRPDISGLMTQIVQFLSKNGAPFTVNIYPFLSLYGNDDFPFNYAFFDGVDNPINDNGTPYTNVFDANFDTLVAALKSVGFGDLPILVGEVGWPTEGDKNANVGNALRFYNGLLPRLAANRGTPRRPGHIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFPMDLSGQNQNKFLIGAQNVKYLAPRWCMFNPDAKDLSKLPDNINYACTFGDCTALGYGSSCNNLDANGNASYAFNMYFQVQNQNPMACNFQGLGKLTTDNISTPTCNFIIQIVNSSASSLMPSLVAFLFVSLFMILFS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02028 462 FunFam Glucan endo-1,3-beta-glucosidase 5 7 334 - -
Pumo5g02028 462 Pfam X8 domain 350 418 IPR012946 -
Pumo5g02028 462 Pfam Glycosyl hydrolases family 17 8 327 IPR000490 GO:0004553|GO:0005975
Pumo5g02028 462 Gene3D Glycosidases 6 336 - -
Pumo5g02028 462 SMART X8_cls 349 432 IPR012946 -
Pumo5g02028 462 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 421 IPR044965 GO:0004553|GO:0005975
Pumo5g02028 462 ProSitePatterns Glycosyl hydrolases family 17 signature. 243 256 IPR000490 GO:0004553|GO:0005975
Pumo5g02028 462 SUPERFAMILY (Trans)glycosidases 8 327 IPR017853 -
Pumo5g02028 462 FunFam Glucan endo-1,3-beta-glucosidase 8 345 441 - -
Pumo5g02028 462 Gene3D - 346 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02028 Pumo-Chr5 56007526 56011642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02028 5 437 Miscellaneous Gene Families AT1G64760 78.291 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02028 - - gmx:100815300 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02028 5 56007526 56011642 Pumo5g02028 5 56007526 56011642 ECH