Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo5g02020 | ATGGCAATTGCACGCACTGGGGTCTACGTCGACGACTATTTGGAGTACGCGAGCACATTACCCGCTGAACTTCAGAGACTGCTTAACACTGTCCGCGAACTCGATGATCGATCCCAATCTATGATAACCCAGACCAGGCAGCAGACAAAGTACTGTATGGGGTTCTCATCACATGGCTCTAAGAAGGGTAATCACAGTTATAATAACAATTATGGGAATGAGGACGATGATGCTGCTATTGAGAAAATGCGAAAAGAAATCGAGGCAAATCAGGATAGTGCATTGAGTCTATGTACTGAGAAGGTTTTGCTGGCACGACAAGCATATGACCTGATAGATAGCCATGTAAAACGACTTGATGAGGATTTAAACAACTTTGCCGAAGATTTAAAGCAAGAGGGTAAAATACCACCAGATGAACCAGCAATTCTGCCCCCATTGCCTATAGTCCCTAAAGCTGAAAAGCGCAAGCCCATATATATAACTCCTCAATCAAAGAGAATTGATTACAGGGATAGAGAATGGGATAGGGAGCGCGATAGGGACTTCGAGTTGATGCCTCCACCAGGAAGTCATAAAAAGGAGTATGCTACCCCGATGGATGTTGATCAACCCATTGATCCAAATGAACCTACATACTGTGTTTGTCATCAGGTATCTTTTGGAGATATGATTGCTTGTGACAATGAAAATTGCCAAGGAGGTGAATGGTTCCACTATGCATGTGTTGGGCTAACGCAAGAGACAAGGTTCAAGGGAAAGTGGTACTGCCCGACTTGCATATTACTCCCACAATGTCAACGATGA | 807 | 0.4399 | MAIARTGVYVDDYLEYASTLPAELQRLLNTVRELDDRSQSMITQTRQQTKYCMGFSSHGSKKGNHSYNNNYGNEDDDAAIEKMRKEIEANQDSALSLCTEKVLLARQAYDLIDSHVKRLDEDLNNFAEDLKQEGKIPPDEPAILPPLPIVPKAEKRKPIYITPQSKRIDYRDREWDRERDRDFELMPPPGSHKKEYATPMDVDQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYACVGLTQETRFKGKWYCPTCILLPQCQR | 268 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo5g02020 | 268 | PANTHER | INHIBITOR OF GROWTH PROTEIN | 2 | 261 | IPR028651 | - | |
| Pumo5g02020 | 268 | Pfam | Inhibitor of growth proteins N-terminal histone-binding | 9 | 126 | IPR024610 | - | |
| Pumo5g02020 | 268 | FunFam | PHD finger protein ING | 205 | 263 | - | - | |
| Pumo5g02020 | 268 | SUPERFAMILY | FYVE/PHD zinc finger | 187 | 261 | IPR011011 | - | |
| Pumo5g02020 | 268 | ProSiteProfiles | Zinc finger PHD-type profile. | 211 | 263 | IPR019787 | - | |
| Pumo5g02020 | 268 | SMART | ING_2 | 9 | 126 | IPR024610 | - | |
| Pumo5g02020 | 268 | Gene3D | - | 5 | 124 | - | - | |
| Pumo5g02020 | 268 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 205 | 262 | IPR013083 | - | |
| Pumo5g02020 | 268 | CDD | ING_plant | 17 | 123 | - | - | |
| Pumo5g02020 | 268 | CDD | PHD_ING | 213 | 260 | - | - | |
| Pumo5g02020 | 268 | SMART | PHD_3 | 213 | 261 | IPR001965 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo5g02020 | - | - | gmx:100787916 | 535.798 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pumo5g02020 | 5 | 55885134 | 55890468 | Pumo5g02020 | 5 | 55885134 | 55890468 | ECH |