Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02019 ATGGGAAGGAGTCTCAGCCCTTTGGTAAGGCAAGAGCTGGCAAATCTTGACAAAGATGAAGATAGTCGCAAATCAGCCATGAAGGCATTGAAGTCCTATGTGAAAGATTTGGATCCCAAGGCCATTCCTTTCTTTCTTGCAAAAGTTTCTGAGAGCAAGGAAAATTGTCCTGGGGAGTTCACAATTTCAATCTATGAAGTCCTTGCACGGGTTCATGGTGTCAAAATTGTTCCCTTGATAGACAACATCATGAGAACCATAGTAAAGACTTTGGCTTCAAGTGCAGGGTCTTTCCCTCTCCAACAGGCTTGCTCAAAGGTGATTCCAGCAATTGCAAGATATGGAATTGACCCCTCAACCCCAGAAGACAAAAAGAAGCACATAGTTCAGTCCCTTTGCACGCCTCTTTCCGATTCTCTCTCGAGTTCTCAAGAGAGCCTTGCTTCAGGTGCTGCCCTTTGCTTGAAGGCTCTGGTGGATTCAGAAAACTGGAGGTTTGCATCTGATGAATTGGTCAATAGGGTTTGCCAGAATGTTGCTGTGGCATTAGATGGAAAGTCTAGTCAAACCAACTCACACATGGGTCTGGTTATGTCGTTGGCCAGGCGCAATGCTTTGATCATTGAAGCATATGCAAGGTTGCTCATACAATCTGGACTAAGGATACTGAATGTTGGCCTTGTGGAGGGGAATTCTCAGAAAAGGCTTTCATCCATCCAGATGATCAACTACTTGATGAGAAGTTTGGACTCTAGGAGCATATTCTCAGAGATTGAATTGATAATTGAGGAGATGGACAAGTGCCAATCTGATAAAATGGCATTTGTGCAAGGTGCAGCACTTGAGGCTTTGCAAACTGCCAGGAGAATTGCAAGTGACAAAAAGCCAAGATATGCAAAAAGTCCTGCTTCAGTGACAGGGTCAAATTTTAGTAGGAGAGAAGGAGACTATATGGAGGGAGAGAATACTTCGTCTGGTGATGGAGACCATACTCCTTCCTCGCTTACACCAGAATCACGTACATTCGACTTTTTCCCTGGATATGAATCTGTTGAGTCTCCTATTTCAAGCAACTTAAACTATGAACGAAGAAGCGTGACTAGGAAGCTTTGGAGTAATGAAAATGGAGGGGTTGATGTGTCTCTAAAGGATGGCTTGTTTTCACAAGTAGGAAAAGAAGGTGCTTTGTTGGAGCATTCATTGATTCACGAGTCTCCCAATGGAGAGGGGGATTATACAGAGGGGTTTGCTGGTTTCATTGGCAGAAATCCCAGGAATGGAGTATCCAAAAGTACCACCACAAGTCCACTAAGGTCACGCACTCAGGCAACTGTTGACAGCATAAAAATCTTTAAGACCCCTAGAAAGCTCATTCACTCTCTTCAAGATTCAAGTGATGTGTCTTTTGGTTGCTCTAAGAAACAGAGTAGAAGGTATAGGAGTCTATCCTCTGGCAACATTGAGTGGAGTCCAGCTTCTAAATATGACCAGAATGGTTTCTCAGATGATGTGAAGTGTGATAGTGAAGTATTTGAAGGTTGTGCTGAGGTTGAGTTCCAAGGTGGCTCAGAGTCAGTTTCATCAACTGATGACCTTCCTTTAGATGCCAATAAGCAGATGCCTACTGAAGTGGTTCCTGAAAAAAGAAATGTTACACCAACTGCACTGCAAAAGACTAAATATAAATTGGTTTGTGGTCTTTCATTTGTTCTACTTGCAGTGGCTACTCCATTACTTTGGATCAATAGTCAGGATGAAGGTCATTATCTTGTTCCAACATAA 1782 0.4299 MGRSLSPLVRQELANLDKDEDSRKSAMKALKSYVKDLDPKAIPFFLAKVSESKENCPGEFTISIYEVLARVHGVKIVPLIDNIMRTIVKTLASSAGSFPLQQACSKVIPAIARYGIDPSTPEDKKKHIVQSLCTPLSDSLSSSQESLASGAALCLKALVDSENWRFASDELVNRVCQNVAVALDGKSSQTNSHMGLVMSLARRNALIIEAYARLLIQSGLRILNVGLVEGNSQKRLSSIQMINYLMRSLDSRSIFSEIELIIEEMDKCQSDKMAFVQGAALEALQTARRIASDKKPRYAKSPASVTGSNFSRREGDYMEGENTSSGDGDHTPSSLTPESRTFDFFPGYESVESPISSNLNYERRSVTRKLWSNENGGVDVSLKDGLFSQVGKEGALLEHSLIHESPNGEGDYTEGFAGFIGRNPRNGVSKSTTTSPLRSRTQATVDSIKIFKTPRKLIHSLQDSSDVSFGCSKKQSRRYRSLSSGNIEWSPASKYDQNGFSDDVKCDSEVFEGCAEVEFQGGSESVSSTDDLPLDANKQMPTEVVPEKRNVTPTALQKTKYKLVCGLSFVLLAVATPLLWINSQDEGHYLVPT 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02019 593 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 363 IPR033337 GO:0005874|GO:0008017
Pumo5g02019 593 MobiDBLite consensus disorder prediction 292 342 - -
Pumo5g02019 593 Gene3D - 4 315 IPR011989 -
Pumo5g02019 593 FunFam protein SINE1 isoform X1 2 312 - -
Pumo5g02019 593 SUPERFAMILY ARM repeat 13 287 IPR016024 -
Pumo5g02019 593 MobiDBLite consensus disorder prediction 324 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02019 Pumo-Chr5 55877949 55881094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02019 - - gmx:102659858 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02019 5 55877949 55881094 Pumo5g02019 5 55877949 55881094 ECH
Pumo5g02019 5 55877949 55881094 Pumo6g02209 6 41159065 41162868 PCT