Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02017 ATGAACCCTGATGGAGGGATGGCTCAAGGTGTTTATGGGGATAGCTGCTCTTACATGTACCATCAAGGTTATGGTTATACACCGTATGGAACATATGCACCATCCAATTCCTCATCTCCAATGATTCAACAAGATGGTCAGAATTATGGGCTGCAACAGTACCAGTATCCTTGTTCTTATTACAAATCTCCAGCATCTGCTGATGTGTCATTTACTCCAAACAAAATCAGTGTTCCACAAGGAGAAATATCAACTGCAATTGATGCTGATCGTGTTGCTTCATTGAATGTTGTGAATAAAGGAAACACTGTTAACATGGCCAATAGTGATTTTACCAATAATAATGGGTTGAAGCCATTTTTAACTAGTTCCCAGCACACATCTTTGAATACAAGTGATTCTTATCAAGGGACTAGCTTGCCAGCTTATGCTCCTTTGTCAGGATATCAGGGTCCAAGAATCACCCATGGTACACAGTTGCCAGTCCCTTCAGATGCGTCCTTTGTATCTGATAGACAGTCCAAACATGGAGCCAAGGTTGGATTGTCTTCATCAGTGCCTGTCAAAGATTTTACATCTCAAAGGAATCAAAGACTTCCTCAGCCACTTCCACAATTCACTAACATGAATGGTTCCAGGCATCCATCTGGACTTGATCTGGTTTCTGGATTCATGAACGGGATGTATCCAAGCAACAGGATGTACAGCCAATATGGAAACACATTTAGGCCTAATTCTCGTTTTGGATCTGCTGGGTATGGATCTAGAATGGGCCCTGTTGATAGCAAACTTAATGCCACAGGGTATGGCTGCGGTCTTAACCATTTTAAAAAAAGTACGGATGGTTTCAGCGAGCTAAATAAGGGACCCAGAGCTGCCAAGAGTTCTGATAATAAAAACATCAAAAGTCTTGGACCTGTCACATTATTACTCAAAGGACAGAACCTTCCAGTGAAGAGTGATAACAAAGAAGTTCCTCTGGTTCCCAACAAGGAACAGTACAACGGGAAAGACTTTACTGAGAATTATTCTGATGCCAAGTTTTTTGTCATCAAATCCTATAGTGAGGATGATGTTCATAAAAGCATAAAATATAGTGTTTGGGCAAGCACCCCTAACGGCAATAAAAAGCTGGATGCAGCATATCAGGAAGCCAAAGAGAAGCCTGGTGGCTGTCCCATATTTTTGTTATTTTCGGTCAACACTAGTGGACAATTTGTTGGTTTAGCAGAGATGTTGGGTCCTGTTGATTTTGGTAAAACTGTAGATTATTGGCAGCAGGACAGGTGGACTGGTTGCTTTTCTGTGAAGTGGCATGTCATAAAGGATATTCCAAATAGCACGTTGAGGCACATAACACTAGAAAACAATGAAAACAAACCTGTGACAAATAGTAGGGATACTCAGGAGGTTAAGTTTGAGAAGGCTGTTCAAATTGTCAAAATTTTCAAGGGAGCATTCAAGCCAAACATGCATCTTGGATGA 1485 0.4108 MNPDGGMAQGVYGDSCSYMYHQGYGYTPYGTYAPSNSSSPMIQQDGQNYGLQQYQYPCSYYKSPASADVSFTPNKISVPQGEISTAIDADRVASLNVVNKGNTVNMANSDFTNNNGLKPFLTSSQHTSLNTSDSYQGTSLPAYAPLSGYQGPRITHGTQLPVPSDASFVSDRQSKHGAKVGLSSSVPVKDFTSQRNQRLPQPLPQFTNMNGSRHPSGLDLVSGFMNGMYPSNRMYSQYGNTFRPNSRFGSAGYGSRMGPVDSKLNATGYGCGLNHFKKSTDGFSELNKGPRAAKSSDNKNIKSLGPVTLLLKGQNLPVKSDNKEVPLVPNKEQYNGKDFTENYSDAKFFVIKSYSEDDVHKSIKYSVWASTPNGNKKLDAAYQEAKEKPGGCPIFLLFSVNTSGQFVGLAEMLGPVDFGKTVDYWQQDRWTGCFSVKWHVIKDIPNSTLRHITLENNENKPVTNSRDTQEVKFEKAVQIVKIFKGAFKPNMHLG 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02017 494 MobiDBLite consensus disorder prediction 192 214 - -
Pumo5g02017 494 Gene3D ph1033 like domains 327 487 - -
Pumo5g02017 494 CDD YTH 347 483 IPR007275 GO:0003723
Pumo5g02017 494 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 9 485 IPR045168 -
Pumo5g02017 494 ProSiteProfiles YTH domain profile. 346 483 IPR007275 GO:0003723
Pumo5g02017 494 Pfam YT521-B-like domain 346 484 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02017 Pumo-Chr5 55869160 55872803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02017 - K20102 gmx:100818027 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02017 5 55869160 55872803 Pumo5g02017 5 55869160 55872803 ECH