Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02011 ATGCAATCGCACCTTGTGGTGGGACCCATCTCCGTCGCACGCTATGGTGGCGCCGCCAATTCCAGCCACTTTCACTCCGCCGCACCCTCCACCTGGACCAACCCTCCTCGCCGGCGGTCCCCACTCGTCGTGGCCTCCTCGTCGTCCGCTGCCGTCAACGGCGGCCAGAACTACTACGCCGTTCTCGGCGTCGCCCGCACTGCCACCGCCGTCGAAATAAAACGCGCTTATCGCCTCCTCGCCCGCAAGTATCATCCTGATGTTAGCAAGGATCCACATGCTGCTGAATTATTCAAGAGCATCCATCATGCATATGAAGTACTATCTAATGAAGCAACGAGAGTTCAGTATGATCAAGAACTTCAATTCGGTCACAAGCCTTACAGGGAAAAATGGAGTTACAGCACTGAATTTGAAGAAGAAGCAAGATTCTATAGGTGGGACCGCCTGAGGAAAAAAATGGATAGTGAAAGATACTGGGAGCATTACAATGTCAATGAGGACTACTACTACACCAGTGAAACAGATGAGGAAGAAGATGAAGTAAATTTAGATGAAGAGAGGGGTTCTTTTATTGAAGTGCTTAGATCAGCATTCATGTCATTATTTTTGCTTCAGACGCTTGGATCCCGTCTCTCACTCACATTTAGCAGCCTGACAGCATTGTTTGATCAGAAGTTAGATACTGGCTATAAAATTGGCTATGTAATAGCATGGATTTTGGGTGGGAGGGGTGGCATATTGCTAACATTGTGCTTGTCATTTGCAAGTTGGGTTTGTGGGAAAACCAGTAGCAGTGTTGTTGCACTAGTTGTGGTGGCCATGTGGGTTGGCTCCTACCTTGCAAGGTATGCACCACTTCCCCAAGGTGCTCTATTGGCTCTTCTCTACATGTCCATTAAGCTACAGTCTGACCTAATATAA 924 0.4827 MQSHLVVGPISVARYGGAANSSHFHSAAPSTWTNPPRRRSPLVVASSSSAAVNGGQNYYAVLGVARTATAVEIKRAYRLLARKYHPDVSKDPHAAELFKSIHHAYEVLSNEATRVQYDQELQFGHKPYREKWSYSTEFEEEARFYRWDRLRKKMDSERYWEHYNVNEDYYYTSETDEEEDEVNLDEERGSFIEVLRSAFMSLFLLQTLGSRLSLTFSSLTALFDQKLDTGYKIGYVIAWILGGRGGILLTLCLSFASWVCGKTSSSVVALVVVAMWVGSYLARYAPLPQGALLALLYMSIKLQSDLI 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02011 307 SMART dnaj_3 56 113 IPR001623 -
Pumo5g02011 307 ProSitePatterns Nt-dnaJ domain signature. 98 117 IPR018253 -
Pumo5g02011 307 Pfam DnaJ domain 57 118 IPR001623 -
Pumo5g02011 307 CDD DnaJ 57 110 IPR001623 -
Pumo5g02011 307 ProSiteProfiles dnaJ domain profile. 57 121 IPR001623 -
Pumo5g02011 307 FunFam Uncharacterized protein 54 202 - -
Pumo5g02011 307 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 133 298 - -
Pumo5g02011 307 PRINTS DnaJ domain signature 93 113 IPR001623 -
Pumo5g02011 307 PRINTS DnaJ domain signature 77 92 IPR001623 -
Pumo5g02011 307 PRINTS DnaJ domain signature 59 77 IPR001623 -
Pumo5g02011 307 Gene3D DnaJ domain 44 139 IPR036869 -
Pumo5g02011 307 SUPERFAMILY Chaperone J-domain 56 128 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02011 Pumo-Chr5 55800670 55803972 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02011 20 122 Miscellaneous Gene Families AT1G79030 35.398 3.29e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02011 - - gmx:100791619 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02011 5 55800670 55803972 Pumo5g02011 5 55800670 55803972 ECH