Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02008 ATGAAAACTTGTGTTGTGTGTTGGACTTGCGTTGGTATTTCAGTGTTTGTTCAGAAGAGGGAAGAGTTTGGTGTACACACACAACACAACATGAAGAGCATGGTGACGCCATTGACGAGGGTCTTACCCTTTCGTCACCCAAATGGCCATAATACCCTTCCCTTCTCTATTTCACGCTACCCTTCCTCACCAACCTTCTCCTTCTCCCCTCTCACTCTCACTCTTTCCATGGCCGCTTCACCCCAATCCTCCGCTCCGACTGTGCCGCCTGGTGATGTTAACATAGACAAAGATGGTGTATTTCAATTAATTCAAGCACATCAGGAAAAAGCTGCTAGACTTCCACCAGTTGAGGAAATTCGAACTGTCCTTGATCGTAGCGTACGAGGGATGCTCTCTACATTCTCAAAGAAGTTAGATGGTTATCCATCAGGGTCTATGGTTGACTTTGCATGTGATGCAAATGGATATCCTATATTAGCAGTGAGCGACCTGGCAGTTCATTCAAAGGACCTAACTGCCAATCCTAAATGTTCATTGCTTGTGGCTAGAGATCCTGAAGATAGGACTGATTTAGTGATTACTGTACATGGTGATGCTATCTCTGTACCTGAAAATGATAGAGAAGCCGTTCGAGCTGCATATTTGGCAAGACATCCCAATGCATTTTGGGTTGACTTTGGAGACTTCCGATTCTTGCGCATCGAACCGAAAGTTGTACGATTTGTGTCAGGTGTTGCCACAGCTTTGTTAGGATCAGGAGAGTTTAGTGGAGATGAGTATAAATCTGCAAGAGTTGACCCCATAGCTCAGTTTTCCAAGCCAGTGGCGTCTCATATGAACAAAGATCATGCTGAAGATAACAAAGTGATTGTGCAGCATTGGACCTCAGTTCCAGTGGACTTTGCCTACATACTAGATTTGGATAGTCTTGGTTTCCATGTTAAGGCTGCTTATCAAGGTGATACTTTCAAGCTTCGTGTACCTTTCCCGCGACGTGCAGAAGATAGAAAGGATGTGAAGACTCTCATTGTTGAGATGCTTCAAGCTGCTAGGCCTAAAGTTGATTGA 1071 0.4454 MKTCVVCWTCVGISVFVQKREEFGVHTQHNMKSMVTPLTRVLPFRHPNGHNTLPFSISRYPSSPTFSFSPLTLTLSMAASPQSSAPTVPPGDVNIDKDGVFQLIQAHQEKAARLPPVEEIRTVLDRSVRGMLSTFSKKLDGYPSGSMVDFACDANGYPILAVSDLAVHSKDLTANPKCSLLVARDPEDRTDLVITVHGDAISVPENDREAVRAAYLARHPNAFWVDFGDFRFLRIEPKVVRFVSGVATALLGSGEFSGDEYKSARVDPIAQFSKPVASHMNKDHAEDNKVIVQHWTSVPVDFAYILDLDSLGFHVKAAYQGDTFKLRVPFPRRAEDRKDVKTLIVEMLQAARPKVD 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02008 356 Pfam Pyridoxamine 5'-phosphate oxidase 121 244 - -
Pumo5g02008 356 Gene3D - 266 355 IPR037119 -
Pumo5g02008 356 Pfam Domain of unknown function (DUF2470) 274 347 IPR019595 -
Pumo5g02008 356 Gene3D - 100 251 IPR012349 -
Pumo5g02008 356 PANTHER CREG1 PROTEIN 106 351 - -
Pumo5g02008 356 SUPERFAMILY FMN-binding split barrel 118 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02008 Pumo-Chr5 55766983 55772862 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02008 - - gmx:100792427 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02008 5 55766983 55772862 Pumo5g02008 5 55766983 55772862 ECH