Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02001 ATGGCGAGCGATCCGAGGCAGCAGAGCGAAGCCCAAGTGGCGCTAATCCTGGGCCCGGATTCGGCCCACCTGGAATCCCTAATCTCCCACCTGATGTCCTCCTCGAACGAGCAGCGCTCCCAGGCGGAGTCCCTCTTCAACCTCTGCAAGCAGGCCCGCCCGGAGTCCCTCCTATTGGGCCTGGCCCACCTCCTCCACTCCTCCCCCAACCCTGAGACCCGCACGATGTCCGCCATCCTCCTCCGCCGCCACCTCACGCGCCACCACGAGTCCTTCCTCTGGCCCCTCCTCACAGCCCCCGCCCGCTCCTCCCTCCACTCCCTCCTCCTCTCCTCCCTCCACCAAGAGCCCCTCAAATCCATCACAAAAAAACTCTGCGACACCGTCTCCGAACTCGCCGCCGCCATCCTCCCCGACGACGCCGCCGCCTGGCCCGACCTCCTCCCCCTCCTCTTCCAGTGGGTCACCTCCTCCGACCCGAGACTCCAGGAAATCTCCCTCCTCATATTCGCCCAATTGGCTCATTACATAGGTCAAACCCTACTCCCTCAATTGTCCACTCTCCACTCCGTCCTCCTCCGCTGCCTCCACTCCTCCGCCCCCTCCGACGTCCGCATCGCCGCCCTCGCCGCCAGCATCAATTTCATCCAGTGCCTCACAAATTCCTCCGACAGAGACCGTTTCCAAGACCTCCTCCCTCTCATGATGCAGACCCTCACCGAGGCGCTGAACTCCGGCCAGGAGGCCGTCGCGCAGGAGGCGCTCGAGCTCCTCATCGAGCTCGCCGGCACCGAGCCACGCTTCCTCCGGCGGCAAATTGCCGACGTCGTTGGGTCCATGCTGCAGGTCGCGGAGGCCGAGGCCTTGGAGGAAGGAACAAGACACTTGGCGATTGAATTTGTCGTTACTCTCGCCGAGGCGAGGGAACGCGCCCCCGGAATGATGAGGAAGCTGCCGCAGTTTGTGAGGAAGCTTTTTGGTGTGCTGATGAATTTGTTGCTTGATATAGAGGATGATCCTGCGTGGCACGGTGCAGTGGATGAGGATGAGGACGCGGGTGAGACCAGTAACTATGGGTTTGGACAGGAGTGTTTGGATAGGCTTTCGATTTCGCTCGGCGGGAACACCATTGTGCCTGTTGCTTCTGAGTTGTTGCCGACTTACTTGGCTGCTCCTGAGTGGGAGAAGCACCATGCCGCGCTCATTGCTCTTGCGCAAATCGCGGAGGGTTGTTCGAAGGTGATGATAAAGAATCTGGAGCAGGTATTGTCGATGATTTTAAATTCATTTCGCGATCCCCACCCTCGAGTGCGATGGGCTGCCATAAATGCAATTGGGCAATTGTCCACGGATTTGGGGCCAGACTTGCAGGCTAAATTTCACCACTTAGTGCTGCCAGCTTTGGCTGGAGCCATGGATGATTTTCAAAATCCAAGAGTACAGGCTCATGCTGCTTCTGCAGTGCTAAATTTTACCGAGAATTGTACCCCAGATATCCTAACACCTTACTTAGATGGGATTGTGAGCAAACTTTTGGTACTCCTGCAGAATGGGAAGCAAATGGTTCAAGAAGGGGCTTTGACAGCTTTAGCATCAGTTGCTGATTCTTCACAGGAGCAATTTCAAAAGTATTATGATGCTGTGATGCCATACTTAAAAGCTATTCTAGTGAATGCAAATGATAAATCTAATCGTATGCTTCGAGCCAAAGCAATGGAGTGCATTAGTTTGGTAGGAATGGCCGTTGGAAAGGAGAAGTTCAGGGATGATGCCAAACAGGTTATGGATGTCCTGATGTCACTGCAACAATCTCAACTGGACGCTGATGATCCAACTGCAAGTTACATGTTACAAGCATGGGCGCGGCTTTGCAAGTGCCTCGGGCAGGATTTTCTCCCATATATGGGTTTTGTGATGCCTCCTCTGCTCCAGTCTGCACAACTTAAGCCTGATGTGACCATTACATCAGCGGATTCTGATACTGAATTTGATGAAGATGATGACAGCATTGAAACAATCACACTTGGGGATAAAAGGATAGGCATTAAGACTAGTGTCTTGGAGGAGAAGGCTACTGCTTGTAACATGCTATGCTGCTATGCTGATGAGTTGAAGGAAGGATTTTTTCCTTGGATTGACCAGGTTGCTTTCACATTGGTTCCTCTTCTTAAATTTTACTTCCATGAAGAAGTTAGGAAGGCAGCAGTTTCAGCCATGCCGGAACTGTTGTCCTCGGCAAAATCAGCTGTAGAGAAGGGACAATCACAAGGACGTGATGAGACTTACATAAAACAGTTGTCTGATTATATAATACCAAATTTGGTGGAGGCTTTACACAAGGAGCCAGAAGTAGAAATTTGTGCAAGCATGTTGGACGCATTGAATGAATGCATACAGGTCTCTGGATCACATCTAGATGAAAAGCAAGTTCGGAGCATTGTTGACGAGATTAAACAAGTCCTTACGGCCAGTTCATCAAGAAAACATGAAAGAGCAGAGAGGGCCAAAGAAGAGGACTTTGATGCTGAAGAAAGAGAAATACTCAAGGAAGAAAATGAGCAAGAAGAGGAACTTTTTGATCAAGTTGGTGATTGCTTGGGAACTTTGATAAAAACATTCAGGGCATCTTTCTTGCCTTTCTTTGAAGAGCTGTCCTCATACCTAACACCTATGTTTGGTAAAGACAAAACCTCAGAGGAAAGGAGAATTGCCATTTGTGTATTTGATGATGTTGCCGAGCACTGTCGTGAAGCTGCTCTTAAATATTATGATTCTTATCTTCCATTCTTACTTGAAGCTTGCAATGATGAATATCCAGATGTTCGACAGGCTGCTGTTTATGGTGTTGGTGTTTGTGCCGAGTTTGGTGGATCTGTTTTCAAACACCTTGTTGGAGAGGCACTTTCAAGGTTAGATGCTGTTATAAGGCATCCAAATGCACTACATTCTGATAATGTAATGGCATATGACAATGCCGTTTCAGCTCTTGGAAAAATATGCCAATTCCACCGTGATAGCATAAATGCAGCACAGGTTGTTCCTGCCTGGCTAAGTTGCTTGCCTATAAAAGGTGATTTGATTGAGGCTAAGGTTGTGCATGACCAACTTTGTTCAATGGTTGAAAGATCGGATAGAGAACTTATAGGTCCCAACAATCAATATCTTCCCAAAATTGTTGCAGTTTTTGCCGAGATTTTATGTGCGGGAAATGATCTGGCAACCGAACAAACTGTGAGTCGGATGATTAATTTATTGAGGCAGCTTCAACAGACTTTGCCACCTTCTACCCTTGCTTCAACCTGGTCATCCTTGCAGCCTCAGCAGCAGCTTGCACTTCAGACCATCCTATCATCCTAG 3357 0.4963 MASDPRQQSEAQVALILGPDSAHLESLISHLMSSSNEQRSQAESLFNLCKQARPESLLLGLAHLLHSSPNPETRTMSAILLRRHLTRHHESFLWPLLTAPARSSLHSLLLSSLHQEPLKSITKKLCDTVSELAAAILPDDAAAWPDLLPLLFQWVTSSDPRLQEISLLIFAQLAHYIGQTLLPQLSTLHSVLLRCLHSSAPSDVRIAALAASINFIQCLTNSSDRDRFQDLLPLMMQTLTEALNSGQEAVAQEALELLIELAGTEPRFLRRQIADVVGSMLQVAEAEALEEGTRHLAIEFVVTLAEARERAPGMMRKLPQFVRKLFGVLMNLLLDIEDDPAWHGAVDEDEDAGETSNYGFGQECLDRLSISLGGNTIVPVASELLPTYLAAPEWEKHHAALIALAQIAEGCSKVMIKNLEQVLSMILNSFRDPHPRVRWAAINAIGQLSTDLGPDLQAKFHHLVLPALAGAMDDFQNPRVQAHAASAVLNFTENCTPDILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEQFQKYYDAVMPYLKAILVNANDKSNRMLRAKAMECISLVGMAVGKEKFRDDAKQVMDVLMSLQQSQLDADDPTASYMLQAWARLCKCLGQDFLPYMGFVMPPLLQSAQLKPDVTITSADSDTEFDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAFTLVPLLKFYFHEEVRKAAVSAMPELLSSAKSAVEKGQSQGRDETYIKQLSDYIIPNLVEALHKEPEVEICASMLDALNECIQVSGSHLDEKQVRSIVDEIKQVLTASSSRKHERAERAKEEDFDAEEREILKEENEQEEELFDQVGDCLGTLIKTFRASFLPFFEELSSYLTPMFGKDKTSEERRIAICVFDDVAEHCREAALKYYDSYLPFLLEACNDEYPDVRQAAVYGVGVCAEFGGSVFKHLVGEALSRLDAVIRHPNALHSDNVMAYDNAVSALGKICQFHRDSINAAQVVPAWLSCLPIKGDLIEAKVVHDQLCSMVERSDRELIGPNNQYLPKIVAVFAEILCAGNDLATEQTVSRMINLLRQLQQTLPPSTLASTWSSLQPQQQLALQTILSS 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02001 1118 Coils Coil 833 853 - -
Pumo5g02001 1118 Gene3D - 20 1117 IPR011989 -
Pumo5g02001 1118 SUPERFAMILY ARM repeat 690 1093 IPR016024 -
Pumo5g02001 1118 Pfam HEAT repeats 388 487 - -
Pumo5g02001 1118 Pfam HEAT repeat 927 954 IPR000357 GO:0005515
Pumo5g02001 1118 ProSiteProfiles HEAT repeat profile. 422 460 IPR021133 -
Pumo5g02001 1118 Pfam Importin repeat 6 787 890 IPR041389 -
Pumo5g02001 1118 Pfam Importin repeat 288 379 IPR041653 -
Pumo5g02001 1118 SUPERFAMILY ARM repeat 20 829 IPR016024 -
Pumo5g02001 1118 PANTHER IMPORTIN BETA 28 1090 IPR040122 GO:0006606
Pumo5g02001 1118 SMART TOG_3 371 612 IPR034085 -
Pumo5g02001 1118 Pfam Interferon-related developmental regulator (IFRD) 491 627 IPR007701 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02001 Pumo-Chr5 55675576 55687023 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02001 K20222 - gmx:100797431 2025.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02001 5 55675576 55687023 Pumo5g02001 5 55675576 55687023 ECH