Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02000 ATGGTTCGTTCTTCCTTGCTCCACTACTACTCTCAACGCCGTGTTGCAGGCTCTTTCAGGGGCTTCTTCTTCATCCCCACAACCTTAGCTCTCTTCACCTCTCTCTTCATTCTCTTCTACATTTACTCCACTTCAAACCTCTTCACCCATCACAACCACCACCACCACCGTTCCACTTCTCATTTCAAATCACCCTCTCCCTTTTCCAATACCCCTTTTATTTCTACCACACCCCACTTCGTCCCTATCTTCCACAACAACGCTTCTGAGTCCACCAAGCCTCGGACTTTCCAATTGGGGTATGGCCCCAGACCGCAAAGTCAACGGGGTCTGCCTCTGCCACCGCAATTCAGCTCAAAGGGAGAATTTGAGAATAACAACGACGTGTTCCATGATAGAGATATCTTTCTGGAAGACTATAAAGAAATGAATAGGAGCTTAAAGATATATGTTTATCCTCACAGGGAAGATGATCCTTTTGCAAACGTGCTTTTGCCTGTGGAATCTGAACCTGGTGGCAATTATGCCAGTGAAAGTTACTTCAAAAAGGTACTTATGAAGAGCCATTTCATTACAAAAGACCCAACAGAAGCAGATCTTTTCTTTCTGCCCTTTTCCATAGCAAGATTGCGGCATGATCGTAGAGTTGGTGTGGGAGGTATACAGGACTTCATTAGAGACTACATTCAGAATATCAGGTACAAGTATCCATATTGGAACCGCACAGGTGGTGCCGATCACTTTTATGTTGCTTGTCATTCAATTGGAAGGTCTGCCATGGACAAAGCACCTGATGTGAAATTCAATGCCATTCAAGTTGTATGCTCATCTAGTTATTTCCTAACTGGGTATATTGCTCATAAGGATACGTGCCTACCACAAATTTGGCCAAGAAAAGGAAATCCCCCTAATCTTGTTTCATCAAAGAGGAAAAGGCTAGCTTTCTTTGCTGGAGGAGTAAATTCCCCAGTACGTGTAAAGCTTCTTGAGACATGGAAAAATGATTCAGAAATCTTTGTTCACCATGGAAGACTTAAAACACCATATGCAGACGAATTGCTAGGAAGCAAGTTCTGCTTTCATGTTAAGGGCTTTGAAGTGAACACAGCTCGTATTGGAGACTCTTTATACTATGGTTGCGTTCCAGTGATCATTGCCAACTACTATGACCTTCCATTCGCTGATGTGTTAAACTGGAAGAGCTTTTCAGTTGTTGTTACTACCTTAGATATTCCCTTACTGAAAAAGATCCTCAAGGATATCATCAGTTCTAATAGATATTTGATGTTACAAAGCAATGTCTTGAAGGTGAGGAAACACTTCCAATGGCATTCACCCCCGCAAGACTTTGATGCATTTTACATGGTTATGTATGAAATATGGCTTAGACGAAGTTCTATAAAAATTTCGTAG 1413 0.4204 MVRSSLLHYYSQRRVAGSFRGFFFIPTTLALFTSLFILFYIYSTSNLFTHHNHHHHRSTSHFKSPSPFSNTPFISTTPHFVPIFHNNASESTKPRTFQLGYGPRPQSQRGLPLPPQFSSKGEFENNNDVFHDRDIFLEDYKEMNRSLKIYVYPHREDDPFANVLLPVESEPGGNYASESYFKKVLMKSHFITKDPTEADLFFLPFSIARLRHDRRVGVGGIQDFIRDYIQNIRYKYPYWNRTGGADHFYVACHSIGRSAMDKAPDVKFNAIQVVCSSSYFLTGYIAHKDTCLPQIWPRKGNPPNLVSSKRKRLAFFAGGVNSPVRVKLLETWKNDSEIFVHHGRLKTPYADELLGSKFCFHVKGFEVNTARIGDSLYYGCVPVIIANYYDLPFADVLNWKSFSVVVTTLDIPLLKKILKDIISSNRYLMLQSNVLKVRKHFQWHSPPQDFDAFYMVMYEIWLRRSSIKIS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02000 470 Pfam Exostosin family 144 420 IPR040911 -
Pumo5g02000 470 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 39 459 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02000 Pumo-Chr5 55662759 55666728 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02000 - - gmx:100798319 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02000 5 55662759 55666728 Pumo5g02000 5 55662759 55666728 ECH