Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01962 ATGTCTGCAGAATCTTCATCCACCTCGGTGGCCGTCGCAGATGGACAATCCAAGAATGCCAGGAAACCCAAATATTCTAGATTCTCACAGCAAGAACTTCATGCCTGGCAACCAATTCTAACACCTAGTTGGGCCATTTCAATATTTACGGTTATAGGACTCATATTCATTCCTGTTGGTCTTGCTTCATTGTTTGCATCAGAGAGTGTGGTGGAAGTTCCCTTCCGATATGATGATGAATGCCTTCCACCTGCAAATAAAAATGATGCAGTGGCATATATTAAAGATGTTGGGTCAAACAAAACTTGCACCAAGAAATTGACTGTTAAGAATAAAATGACGGCTCCTGTTTATGTCTATTACCAGCTTGATAACTTTTACCAAAACCATCGCCGATATGTTAAAAGTAGAGATGACAAACAACTGAGGAGTAAAGCAGCTGAGAATGATGTAGGCACATGTAGTCCTGAAGACTATACACCAAATGACATGGGCCACAAACCAATTGTTCCTTGTGGCCTTATTGCATGGAGTCTGTTTAATGACACATACAAACTTTCAAGCAATAACAAGGATTTGGTGATCAACAAAAAGGACATAGCATGGAAGAGTGACCAAAATGGGAAATTCGGGTCTGATGTTTATCCAAAGAATTTTCAGACTGGAGGTTTGATTGGGGGTGCTAGACTTAATGAGAGCATACCATTGAGTGACCAAGAGGATCTCATTGTTTGGATGCGGACTGCAGCACTGCCTACTTTCAGAAAACTATATGGAAAGATTGAGACTGACATTGAAGTTAATGAAGAAATAATGCTTGTAATAGAGAACAATTATAATACATACGAGTTTGGAGGCAGAAAGAGCATTGTTCTTTCAACCACAACTTGGGTTGGTGGAAGAAATCACTTCTTGGGGATGGCATATATTCTCATTGGTGGGATTTCCTTGTTATTGGCTGTAGGTTTCTTACTTCTATATGTGATGCAACCAAGACCACTTGGGGATCCATCATACTTGTCTTGGAACAGAAATCCCGGAAGTCTAAGGTGA 1053 0.4036 MSAESSSTSVAVADGQSKNARKPKYSRFSQQELHAWQPILTPSWAISIFTVIGLIFIPVGLASLFASESVVEVPFRYDDECLPPANKNDAVAYIKDVGSNKTCTKKLTVKNKMTAPVYVYYQLDNFYQNHRRYVKSRDDKQLRSKAAENDVGTCSPEDYTPNDMGHKPIVPCGLIAWSLFNDTYKLSSNNKDLVINKKDIAWKSDQNGKFGSDVYPKNFQTGGLIGGARLNESIPLSDQEDLIVWMRTAALPTFRKLYGKIETDIEVNEEIMLVIENNYNTYEFGGRKSIVLSTTTWVGGRNHFLGMAYILIGGISLLLAVGFLLLYVMQPRPLGDPSYLSWNRNPGSLR 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01962 350 PANTHER CELL CYCLE CONTROL PROTEIN 50 18 342 IPR005045 GO:0016020
Pumo5g01962 350 PIRSF Lem3/Cdc50 1 345 IPR005045 GO:0016020
Pumo5g01962 350 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 64 332 IPR005045 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01962 Pumo-Chr5 55103352 55106509 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01962 K26935 - gmx:100779539 666.766