Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01961 ATGGAAATTGCTAAGCATGCACATGCAAATCGGTCTTATGAAGATTTTGATCCTTTATTTGTGTGGCGTAGAGAAGAGGGCCGTGACACCCTTGAACTTCACCTTCCAGGTTTTAGGAGAGACCAAATAAGAATTCAGATAAACCATGTTGGTTTATTGGTGATAAGTGGGGAGCGTCCTACGGAAGGAAATAATAGATGGAAACGTTTCAAGAAAGAATTCGAAATCCCATCATATTGCAATGACGATGCAATTCATGGCAACATGATGCAGAGCATTCTTTCGGTGGTGATGCCAAAGAAAAGTCCTCAAATTATTCACCAAGAGGAGCAAGAACACAAGAAAGAGAAAAGGACAAATAAAAAAGAAGAGGCAATAGCTGAAGAAGATATAGATCATGCATCAGAGCACGAGTTTGAAGAAAATTATAATGTGAGGCCGTTGCCACAGGAAACTACTAGAGAAGTTGCCCTCAAATTCATGCTTGTGATGGTTCTGATATTGGTTATAGCAAGTTACCTAGCAGATGTGAGCAAAAGCCTCATGGCTCAAGGTGCTTCGTATTTTCACAATTAG 576 0.401 MEIAKHAHANRSYEDFDPLFVWRREEGRDTLELHLPGFRRDQIRIQINHVGLLVISGERPTEGNNRWKRFKKEFEIPSYCNDDAIHGNMMQSILSVVMPKKSPQIIHQEEQEHKKEKRTNKKEEAIAEEDIDHASEHEFEENYNVRPLPQETTREVALKFMLVMVLILVIASYLADVSKSLMAQGASYFHN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01961 191 Gene3D - 1 108 IPR008978 -
Pumo5g01961 191 CDD ACD_sHsps-like 30 100 - -
Pumo5g01961 191 PANTHER HEAT SHOCK PROTEIN 26 11 141 - -
Pumo5g01961 191 Pfam Hsp20/alpha crystallin family 24 108 IPR002068 -
Pumo5g01961 191 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 11 116 IPR002068 -
Pumo5g01961 191 Coils Coil 106 128 - -
Pumo5g01961 191 SUPERFAMILY HSP20-like chaperones 12 103 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01961 Pumo-Chr5 55091949 55093331 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01961 - - gmx:100527560 309.301