Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01960 ATGGCTTCTGCAGCTCGCTTGGCCTTGTTTGCCATTTCCATGGTTTTGCTTTCCTCAGTGGCTATGGCAACTGATTTCACTGTGGGTGATGGGAAGGGCTGGATTCTTGATTTTAACTACACAGCGTGGGCACAGGACAAAGTTTTCCGTGTTGGTGACACCCTTTGGTTCAATTACGACAACACGAAGCACAATGTGGTGAAAGTGAATGGCACACAATTCGGGGAGTGCAGCTTCAATTCAAATAACGAGGTATTGACGAGCGGAAAGGACAGCATCACGCTGAAAGCCGAAGGGAAAAAGTGGTACGCTTGTAGCGTAGGAAACCACTGCGCTGAACATCAAATGAAGCTCGTCATCAACGTTGAAGCCGCAGGCCCTGCACCTTCTCCTACTTCCTCTGCTCATTCTCTGCTTGCATCTCTATCTGGGGTCCTCATTGTTGCCATCGCTGCCATCTTTGCCTGA 468 0.4936 MASAARLALFAISMVLLSSVAMATDFTVGDGKGWILDFNYTAWAQDKVFRVGDTLWFNYDNTKHNVVKVNGTQFGECSFNSNNEVLTSGKDSITLKAEGKKWYACSVGNHCAEHQMKLVINVEAAGPAPSPTSSAHSLLASLSGVLIVAIAAIFA 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01960 155 CDD Phytocyanin 24 122 - -
Pumo5g01960 155 SUPERFAMILY Cupredoxins 22 122 IPR008972 -
Pumo5g01960 155 PANTHER BLUE COPPER PROTEIN 21 129 IPR039391 GO:0009055
Pumo5g01960 155 ProSiteProfiles Phytocyanin domain profile. 24 124 IPR003245 GO:0009055
Pumo5g01960 155 Pfam Plastocyanin-like domain 37 113 IPR003245 GO:0009055
Pumo5g01960 155 Gene3D - 22 126 IPR008972 -
Pumo5g01960 155 FunFam Cupredoxin superfamily protein 22 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01960 Pumo-Chr5 55052258 55052830 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01960 14 153 Miscellaneous Gene Families AT5G26330 31.548 2.04e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01960 - - gmx:100780078 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01960 5 55052258 55052830 Pumo5g01960 5 55052258 55052830 ECH