Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01948 ATGACATTGTATGAAGTGGTTGGGATTGGTGAAGGGGAAGGTTGTGGAATTGTGGGTAGGGGTGTCGTTGGTGAGGGCAGCCCAACAGCAAAAGAAGCCAAACTGCAGCGTTTTGCTGCTGCTCTGTTCGTCCAGTTGAGCCCTAAAACGCAACAACACTGCTCAGTCGTGTTAGTGGTGACGACGATGAAGGTGGTGGCACTCGTTAGCGGCGGCAAAGACAGTTGCTATGCCATGATGAAGGCTATTCACTATGGCCACGAGATTGTTGCATTGGCCAATTTGATGCCGCTTGATGATTCTGTGGACGAGCTCGACAGTTACATGTACCAAACTGTTGGTCATCAAATTGTTGTCAGCTATGCTGAATGCATGGGATTGCCATTGTTCAGGAGGCGAATACAAGGATCCTCAAGGCATCAGGAGCTTGGTTACAAAGCAACACAAGGTGATGAAGTCGAAGACCTGTTCATTTTGTTAGGTGAAGTGAAAAGGCAGATACCCTCAGTTACTGCAGTTTCTTCTGGAGCCATTGCATCTGATTATCAGAGATTGCGGGTGGAAAGTGTTTGTTCAAGGTTAGGCCTTGTTTCTCTGGCATACTTATGGAAACAAGATCAGTCATTGCTTCTCCAGGAAATGATTACAAATGGAATTGTAGCTGTAACTGTGAAGGTAGCTGCCATGGGTTTGGATCCTGCAAAGCACTTGGGTAAAGAATTAGCCTTCTTAAATGCTTATTTACATAAATTGAAAGAATTATATGGAATCAATGTTTGTGGTGAAGGAGGGGAATATGAAACTTTAACTCTTGATTGCCCGCTCTTTTCTAATGCTCGCATTGTGCTTGATGAATATCAAGTTGTGATGCACTCTTCAGATTCGATAGCTCCTGTTGGAATCCTTCATCCCTTGGCATTTCATTTGGAAAATAAGGCAGATGTTCAGGATTTAAAATCACAAGACAAAATACATGAGATTTGTACACAGAAACTGGGATCTGTGTTTGACGTGCAAGACAGTCTAGAAGGATGTGAGGCCACATGCAAGCCTGTGGATTGTAGAGCTGATCCAATTGATGGCACAGAACATAAATTTAACATCTCAAGAACAAATAACAAGGGCACATTCTCCATATGTTTCTGGTTGCAAGATTCATGCAATGCAGGTTTGCAGGAAGATTTGAAGATTGTTTTGGGGAAAATTGAATCAAATTTATTGGGCCTTGGTTTTGGCTGGGAGAATGTCCTCTATATTCACCTTTACATTGATGACATGAATAAATTCTCTGAGGCAAATGAGACATATGTGAAGTTTATAACACAGGAGAAATGTCCATTTGGCGTCCCGTCTCGTAGTACTGTCGAAATGCCTCTTATAGAAATGGGTTTCAGCAGAGCATACATTGAAGTTCTGGTAACAAACAATAAAGATAAAAAGGTTTTGCATGTGCAGAGTATTTCCTGTTGGGCACCTAGTTGCATTGGGCCGTACAGCCAGGCAACCTTGCATGAGGGTATACTTCACATGGCTGGTCAATTGGGGCTTGACCCTCCTACAATGAATCTTTGCAAGGGAGGCCCTGGTGTTGAACTGGAACAAGCACTAAAAAACAGTGAAGCGGTGGCAAAATGCTTTAATTGTTCAATAACGACATCTGCAATTGCTTTTATTATTTACTGTTCTAAACATATTTCATCATCAGAGAGACTTGATATTCAGGAGAAGCAAGAAACAATCCTTAGGCAGATGAAGATCTCCCATTTACAGGAAGGAGCCACTGACAAAGCATTAGATCCCTTGTTCCTTTATGTTCTTGTTCCTGATCTACCTAAAAGAGCATATGTAGAAGTAAAGCCTATTCTTTATGTCGAGGATGGCACAGATGTAGAATTTGAAGCCATAACAGAAAGATCTTGTTCAGAGACACCACCATGTTATTGGGGTTTCAAGCCGGAAAATTGGCATGATTCTTGCATTCAGAAGTGTGTGATTTCTGGAAAGATATGCGCCATTATACTGTCTATTACAAGTGAGCTGGCTGCGAAGATATGTTTCGATTCTCTGCCTGCTGATTATGTGAATAATGGTCAATATTCTCTTCCTAAGGCGCATATGGAGAAGATATCAAAGTTCTGCATTTACCTTCTTGACAAAGTTATGACAGATAATGACTTTGCTTGGGAAGATATAATGAGTTTGAGGTTCTATATCCCAGCAAGCCTTAAAATGTCAGTGCAGCTATTACAACCTATGTTCTGCAATGCTCTTTTTGAACTTTTGGAAATGAGTCAGAAGAAATTTAAAAGTGGTGAGGAGCCAATCTTCAACATAGTTCCTGTCTTAGGTTCTGGGAGGTCTGCTTCATCCATGGACGATGTAGTAACCTGTGAATTAATGGCTCGGAAATCCTGA 2415 0.4157 MTLYEVVGIGEGEGCGIVGRGVVGEGSPTAKEAKLQRFAAALFVQLSPKTQQHCSVVLVVTTMKVVALVSGGKDSCYAMMKAIHYGHEIVALANLMPLDDSVDELDSYMYQTVGHQIVVSYAECMGLPLFRRRIQGSSRHQELGYKATQGDEVEDLFILLGEVKRQIPSVTAVSSGAIASDYQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGIVAVTVKVAAMGLDPAKHLGKELAFLNAYLHKLKELYGINVCGEGGEYETLTLDCPLFSNARIVLDEYQVVMHSSDSIAPVGILHPLAFHLENKADVQDLKSQDKIHEICTQKLGSVFDVQDSLEGCEATCKPVDCRADPIDGTEHKFNISRTNNKGTFSICFWLQDSCNAGLQEDLKIVLGKIESNLLGLGFGWENVLYIHLYIDDMNKFSEANETYVKFITQEKCPFGVPSRSTVEMPLIEMGFSRAYIEVLVTNNKDKKVLHVQSISCWAPSCIGPYSQATLHEGILHMAGQLGLDPPTMNLCKGGPGVELEQALKNSEAVAKCFNCSITTSAIAFIIYCSKHISSSERLDIQEKQETILRQMKISHLQEGATDKALDPLFLYVLVPDLPKRAYVEVKPILYVEDGTDVEFEAITERSCSETPPCYWGFKPENWHDSCIQKCVISGKICAIILSITSELAAKICFDSLPADYVNNGQYSLPKAHMEKISKFCIYLLDKVMTDNDFAWEDIMSLRFYIPASLKMSVQLLQPMFCNALFELLEMSQKKFKSGEEPIFNIVPVLGSGRSASSMDDVVTCELMARKS 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01948 804 FunFam diphthine--ammonia ligase 63 220 - -
Pumo5g01948 804 CDD Alpha_ANH_like_IV 64 276 IPR002761 -
Pumo5g01948 804 FunFam Diphthine--ammonia ligase 221 317 - -
Pumo5g01948 804 NCBIfam diphthine--ammonia ligase 63 293 IPR002761 -
Pumo5g01948 804 FunFam Endoribonuclease 475 623 - -
Pumo5g01948 804 Gene3D - 222 319 - -
Pumo5g01948 804 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 62 303 - -
Pumo5g01948 804 Gene3D - 474 635 IPR035959 -
Pumo5g01948 804 Gene3D HUPs 59 219 IPR014729 -
Pumo5g01948 804 Pfam Endoribonuclease L-PSP 491 620 IPR006175 -
Pumo5g01948 804 CDD eu_AANH_C_2 498 622 - -
Pumo5g01948 804 PANTHER DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN 63 802 IPR030662 -
Pumo5g01948 804 Gene3D - 369 473 IPR035959 -
Pumo5g01948 804 FunFam Endoribonuclease 355 474 - -
Pumo5g01948 804 SUPERFAMILY YjgF-like 389 461 IPR035959 -
Pumo5g01948 804 SUPERFAMILY YjgF-like 480 627 IPR035959 -
Pumo5g01948 804 Pfam Diphthamide synthase 63 292 IPR002761 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01948 K06927 - gmx:100807009 1402.88