Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01150 ATGATAGTGCTTCGTTTTCTAGAGAAGCTTTGTGATGATTCACAGATATTGGTAGACATTTTTATCAACTATGACTGTGATGTCAATTCAACAAACATATTTGAGAGGATGGTAAATGGGCTTCTTAAAACTGCCCAAGGTGTCCCTCCTGGTGCAACGACCACAGTTTTGCCACCTCAAGAGGAAACACTAAAACTTGAAGCCATGAAGTGCTTAGTTGCTGTTTTGAAATCAATGGGAGACTGGATGAACAAACAATTGCGCATTCCAGATCCTCATTCAGGCAAGAAGTTGAAGCATTTGATAATGGCCATGAAGCTGGAGGTCTTCCCATGGCAAATGGGAATGAAGAAGAGCCAGTTGAAGGATCAGACACTCATTCTGAAATCTCCAATGAGGCATCTGAGGTTTCAAATATTGAACAACGCCGGGCTTATAAACTGA 444 0.4144 MIVLRFLEKLCDDSQILVDIFINYDCDVNSTNIFERMVNGLLKTAQGVPPGATTTVLPPQEETLKLEAMKCLVAVLKSMGDWMNKQLRIPDPHSGKKLKHLIMAMKLEVFPWQMGMKKSQLKDQTLILKSPMRHLRFQILNNAGLIN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01150 147 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 2 94 - -
Pumo5g01150 147 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 2 33 IPR032691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01150 Pumo-Chr5 25809305 25809951 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01150 K18442 - gmx:100789988 194.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01150 5 25809305 25809951 Pumo5g01150 5 25809305 25809951 ECH
Pumo5g01150 5 25809305 25809951 Pumo7g01013 7 18736285 18747873 PCT