Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01038 ATGGAAATGGAAGCCGCTGACGTGGTCAAAACGACGACGAATCAAACCGAACGGGGTTCGGAGGAGAAGAACAAGAGTTTGAGAACAGAGATTGATACTTCAGCGCCGTTTGAATCGGTGAAGGAAGCGGTTACCATGTTCGGGGGTGGATACTGGAAACCCCTTCACAGTAAGATTACGTGTGTGGCTTCGGATTCTGAGCAGCACTATGTAGAAGAGCTCGGCCCTGAAAAGCTGGAGGAGCAGGCTGCAGTATTGGAGAAAGAACTGATTTTGAAAGAAAGGGAAACTCTTGATGTGTTGAAAGAATTGGAAAGTACCAAAAGGCTTGTTGAAGATTTGAAATCAAAGATACAGAAGGAAGAGTCTGAAGCGAATTTGAATCTTCAGATGAGCGAATGTGATAAAAAATCAGTTGATGAGGAGAATGAAGAAAAGGAAAACCAACGGAGTCAATTGAATGTTCTTCAACCTTCCAGGGAAGGTTTTATCCCTTCGTCTGCTCCAGGCTTAATACTAATGGAATTGAAGCAGGCCAAATTGAATTTAACCAGAACTACTAATGACCTTGCTGATGTCCGAGCTTCTGTTGAATCGCTTAATAAAAAATTAGAGAAGGAAAGAATCTCACTTGAGAAAACACGCGAGAGGTTAGCTCAAAATACTTCAAAAATATCTTCTCTCGAGGAAGAGCTAAACCAGACCAGATTAAGGCTGCAAATAGCAAAAGATGCTGAAATTAAAGGTGCTTCAGATGATCCTTCAGATATTACAAGAGAGCTCCAGCGATTGAGTTCTGAGGCAGAGAATTTCAAAAGAATGGGAGAATCTGCAAAATCAGAAGTTTTGAGAACAATGTCTGAGATTGAACAGACAAAAACCATGATAAGAACTGCTGAAATCAGATTGGTTGCAGCCAGAAAAATGAAAGAAGCTGCTAGAGTTGCCGAAGCTTTTGCCCTTGCAGAAATCAATGCTTTATCTAATCAGGACAGCTCACCTGGAAATCAGGTTACTCTTTCATTTGAAGAGTATACTGCTCTGACATGCAAAGCTCGAGATGCAGAGGAACAATCTAAGAAGAGAGTTGCAAGTGCTATGCTTGAAGTTGACGAAGCAAATTTGTCAAGCATGGACATTTTGAAAAGGGTAGAAGAAGCTACAGAAGAAGTTATAACCAGCAAGAAGGCCCTTGAAGAAGCTCTAGAAAGGGTAGAAGCTGCAAATAGAGACAAGGAATCAGTTGAAGAGGCTATAAGGAATTGGCGGTCCGAGGGTCAAAAAAGACGTTCTTCTATACACAACTCTACCAAGTTCAAAAACTGTTTGTCTCATCATCGGAGAGATCCTCGCTTACTCGATGTGAATGGATTGCATCTGGTAAATGATGAAGCCAAGCCAGTTCTAAAGCCAACCCTATCAATAGGACAAATACTTAGCAGGAAGCTGCTTCAACCGCAAGAGTTTGAAGCTGGAGGAAGAATCTTGGTGAAACAACAGAATGTGTCACTGGGTCAGATGCTAGGCAAACAGAACAATGATCCACCAGTTGATAGACAAGTTGAGAAAGAAACTGGCCATAAGCTGTTTTCTACCAAGAGAAAGAAATTTGGATTTGCACGATTCTCGCATATTTTGTCAAAACAGAAGAAGAAGAAGCCAACCCTGAATTTGAGGTGA 1680 0.4155 MEMEAADVVKTTTNQTERGSEEKNKSLRTEIDTSAPFESVKEAVTMFGGGYWKPLHSKITCVASDSEQHYVEELGPEKLEEQAAVLEKELILKERETLDVLKELESTKRLVEDLKSKIQKEESEANLNLQMSECDKKSVDEENEEKENQRSQLNVLQPSREGFIPSSAPGLILMELKQAKLNLTRTTNDLADVRASVESLNKKLEKERISLEKTRERLAQNTSKISSLEEELNQTRLRLQIAKDAEIKGASDDPSDITRELQRLSSEAENFKRMGESAKSEVLRTMSEIEQTKTMIRTAEIRLVAARKMKEAARVAEAFALAEINALSNQDSSPGNQVTLSFEEYTALTCKARDAEEQSKKRVASAMLEVDEANLSSMDILKRVEEATEEVITSKKALEEALERVEAANRDKESVEEAIRNWRSEGQKRRSSIHNSTKFKNCLSHHRRDPRLLDVNGLHLVNDEAKPVLKPTLSIGQILSRKLLQPQEFEAGGRILVKQQNVSLGQMLGKQNNDPPVDRQVEKETGHKLFSTKRKKFGFARFSHILSKQKKKKPTLNLR 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01038 559 MobiDBLite consensus disorder prediction 128 153 - -
Pumo5g01038 559 Gene3D - 172 333 - -
Pumo5g01038 559 MobiDBLite consensus disorder prediction 134 149 - -
Pumo5g01038 559 Pfam Weak chloroplast movement under blue light 29 151 IPR008545 -
Pumo5g01038 559 Pfam Weak chloroplast movement under blue light 174 429 IPR008545 -
Pumo5g01038 559 Coils Coil 176 245 - -
Pumo5g01038 559 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 30 157 - -
Pumo5g01038 559 Coils Coil 261 281 - -
Pumo5g01038 559 Coils Coil 101 124 - -
Pumo5g01038 559 Coils Coil 381 425 - -
Pumo5g01038 559 MobiDBLite consensus disorder prediction 1 30 - -
Pumo5g01038 559 Coils Coil 129 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01038 Pumo-Chr5 23185136 23189154 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01038 - - gmx:100785049 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01038 5 23185136 23189154 Pumo5g01038 5 23185136 23189154 ECH
Pumo5g01038 5 23185136 23189154 Pumo7g01723 7 45534718 45537911 PCT