Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00974 ATGTTCACCCAATTCCTCATCATCTTCTCCCTCCTCTTCACTCCCTTCATCTCCACCACAGCCCATGACACCGACGATTTCGTGCGCACATTAGATCGCAAAATGTTGGGTTTGGATGAAAATCAAGAAAAGTTCAGCCATTTCAGGTTCTATTGGCATGACGTGGTGAGTGGACGCAACCCTTCATCCGTTGAAGTTGTGTCACCACCCTTGAAGAACTCAACCACGGCCTTTGGGATGGTGAACATGATCGAGAACTCTTTGACTTTGGAACCCCAACTGAACTCCAAATTGGTGGGGAAGGCACAGGGGTTCTATGCTTCCACTTCACAAAGTGAGGTTACCTTGCTCATGGCTATGAACTTTGCCATCACTGAAGGGAAGTACAATGGAAGCTCCATCACGATTTTGGGGAGGAACCCTGTTTTCAACAAGGAGAGGGAGATGCCCGTGATTGGTGGAAGTGGGCTCTTTCGATTTGCTAGGGGTTATGCTCAACTTAGAACTCACTGGTTCTCACCCACCACCAAGGATGCCATTGTTGAGTACAATATTTATGTTTTGCATTATTGA 573 0.4695 MFTQFLIIFSLLFTPFISTTAHDTDDFVRTLDRKMLGLDENQEKFSHFRFYWHDVVSGRNPSSVEVVSPPLKNSTTAFGMVNMIENSLTLEPQLNSKLVGKAQGFYASTSQSEVTLLMAMNFAITEGKYNGSSITILGRNPVFNKEREMPVIGGSGLFRFARGYAQLRTHWFSPTTKDAIVEYNIYVLHY 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00974 190 Gene3D - 34 186 IPR044859 -
Pumo5g00974 190 Pfam Dirigent-like protein 46 187 IPR004265 -
Pumo5g00974 190 PANTHER NUCLEOPORIN-RELATED 32 186 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00974 Pumo-Chr5 20856221 20857355 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00974 - - gmx:100796078 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00974 5 20856221 20857355 Pumo7g01674 7 44457916 44458763 PCT
Pumo7g01675 7 44470706 44471662 Pumo5g00974 5 20856221 20857355 PCT