Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00835 ATGGATCCTTTTTGGGAGTACTTTTGGATTTTTCTCTCCAAGCTTTTGAATACTCTGTATTGGGTATTCACCAAAGCCTTCATGAGATTATATGGTTCTTATTCTTCTAAAGCAATGAAACCACTTTGTTCTTCTGAGTTTTTATGTGACAATGAGCAAGCTGAGTCAATTCATTCTGAGTCTGAAAATTTTGGGGCACTAAATGATACTCTCTCACATGAAAGTGATCAAATTGATTCTAATGGTTGCCAGAAAGAAGCAGAGTCCATGGAAAAATGTTGTTCTGACACTGTTCATGATGGTGGGAATTTTGGGCTTGAAGAAGAGGGAACCACAAAGTTGGTTTTCAAATTTGAATATCAAAAGTGGAATTGCAATTACGATGAAGAATTCAAAGGAGGGAATGGTGAAAGTTGTCATTTTGTGAAGGGGGTTGATGCTGTTTCTGCTAGCACCAATAAGTATGAGTTTATGTCAGGGAAGAGTTTCAGCCACTTCTTGGATGAACCCGAGGCTGAAAATTTCACTGTCAAAGAATGTTTTGTTCGTTTAAATAATGCTTTGAAATTGGAAAATCATGTTAGCAATGATTTTGGGTTCTTATCAAGGAAGAAATTCATGCCAGAAAATTGTGAAAGAGGGGCTATATCAGAAAATCTTAACAATTTCACAGAAAGTGAACACAAAGAGGTGTCAGAGAAGTTCAAAGCTGAGGAATCAAGAGAACAGCCTGTGGAGCCAGTTGTTCGCAATTTTCTTTCTGAAGATGATTTTATTTGTTCAAGTTCTGACTCAGATTCTATTATCAGTTCTTCGGGGGAGGGGTTTTTGTCAGACACAGACTTTGGAACCACTATGGAGTTTGACATATTGGGAAGCAATGAAGAAGAAAATGTAGGGCTAACAGAAGAGGATTTGGACTTTGGGGATGAGAATTTGGATGTTGGATATGAGCCTGATGATTTTACTGAAGAGGATGAAGATATAATGGATGAGCTTGGAAAATTGGAAGAAGAATGTAGGCTAGAGAAGTCTTCAGGTAAAAGTTCTGAAGATAGCAATAGCATCAATTCCAAACATGAACAATCTGTGAAGCCTAATTCACAGGCTTTAACAACTATTGATCTTGAGGATTCCAACCGGTTTGACACACTATGGGAACATCAAGATTTGATAGAACAATTGAAGATGGAGCTGAAGAAGGTCAGAGCCACTGGCCTACCTACCATCCTTGAGGATTCTGAGTCTCCAAGGATAATGGAAGACTTGAAGCCATGGAAAATTGATGAAAAATTACAGCATGATAGCACCACAAATGAGCTTCCAAAATTCTACAGGAGTTATCGGGAACGAATGCGAAAATTCGATATCTTGAATTACCAAAAGATGTATGCTATAGGTGTTTTACAGTCAAAGGACCCACTCCAATCATTTTCAACCCGTAAGAACCCTTCACCAGCATTCACATCCATTCTTCCACGCGGCTTTCGCCTTTCTAGACGTAAACACGCTGAAGCTGACCCAATGAAGAAGTTCATAAGAGAATTGTACAGTGATTTGGAAATGGTTTATGTGGGGCAGTTGTGCCTTTCTTGGGAATTTCTTCAGTGGGAATATGAGAAGGCCTTGAAACTATGGGAATCTGACCAATACGGATTGCTAAGGTTCAATGAAGTAGCAGGGGAGTTTCAACAATTCCAAGTGCTTCTCCAAAGGTTTATAGAGAATGAACCTTTCCTGCAAGGTCCACGGGTTGAAAACTATGCTAGGAATCGTTGTGCAATGCGCAATCTTCTTCAAGTTCCAGTAATAAGAGAAGACAATGCCAAGGATAAAAGGAAATTCAGAATAAGAGAGGCTGAAAAAGATGCAATTTCAAGTGACATGCTAGTGGAGATTTTCGAAGAATCCATCAGAACAATTTGGCGTTTCATAAGAGCCGATAAAGATGCATCTAGCTTGGCACTTAAAGGTCTAAGAGAAAATCAAGTAGAGCTCCAAGACCCTTCAGATTCACAGCTTTTGGTGGAGATTAGAACTGATCTTCAAAAGAAGGAAAAGAGATTGAGAGAGCTTTTGAGGAGTGGAAGCTGCATACTGAAGAAGTTTCAAAAGCATCATGAAGATGGGGCAGATCAAGTGCTTTATTTTTTCTCTCAAGTGGACATGAAATTGGTTTGGAGAGTGTTGAACATGTCAAGGATAACGACGGATCAACTTGCATGGTGTCGTAGCAAACTAAACAAGATCAATTTTGTAAACCGAAGGATACATGTAGAACCATCATTCTTACTTTTTCCTAGTTAA 2307 0.3897 MDPFWEYFWIFLSKLLNTLYWVFTKAFMRLYGSYSSKAMKPLCSSEFLCDNEQAESIHSESENFGALNDTLSHESDQIDSNGCQKEAESMEKCCSDTVHDGGNFGLEEEGTTKLVFKFEYQKWNCNYDEEFKGGNGESCHFVKGVDAVSASTNKYEFMSGKSFSHFLDEPEAENFTVKECFVRLNNALKLENHVSNDFGFLSRKKFMPENCERGAISENLNNFTESEHKEVSEKFKAEESREQPVEPVVRNFLSEDDFICSSSDSDSIISSSGEGFLSDTDFGTTMEFDILGSNEEENVGLTEEDLDFGDENLDVGYEPDDFTEEDEDIMDELGKLEEECRLEKSSGKSSEDSNSINSKHEQSVKPNSQALTTIDLEDSNRFDTLWEHQDLIEQLKMELKKVRATGLPTILEDSESPRIMEDLKPWKIDEKLQHDSTTNELPKFYRSYRERMRKFDILNYQKMYAIGVLQSKDPLQSFSTRKNPSPAFTSILPRGFRLSRRKHAEADPMKKFIRELYSDLEMVYVGQLCLSWEFLQWEYEKALKLWESDQYGLLRFNEVAGEFQQFQVLLQRFIENEPFLQGPRVENYARNRCAMRNLLQVPVIREDNAKDKRKFRIREAEKDAISSDMLVEIFEESIRTIWRFIRADKDASSLALKGLRENQVELQDPSDSQLLVEIRTDLQKKEKRLRELLRSGSCILKKFQKHHEDGADQVLYFFSQVDMKLVWRVLNMSRITTDQLAWCRSKLNKINFVNRRIHVEPSFLLFPS 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00835 768 PANTHER OS09G0413600 PROTEIN 4 768 - -
Pumo5g00835 768 Coils Coil 675 695 - -
Pumo5g00835 768 MobiDBLite consensus disorder prediction 349 371 - -
Pumo5g00835 768 Pfam Protein of unknown function (DUF1666) 518 767 IPR012870 -
Pumo5g00835 768 Coils Coil 385 405 - -
Pumo5g00835 768 MobiDBLite consensus disorder prediction 340 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00835 Pumo-Chr5 16315267 16319568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00835 - - gmx:100785051 1353.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00835 5 16315267 16319568 Pumo5g00835 5 16315267 16319568 ECH
Pumo2g02485 2 54342405 54347062 Pumo5g00835 5 16315267 16319568 PCT