Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00562 ATGGCCTCCCCCTTCACTCAAACCCTTTCAACCTCCAAAGTCATTGATTCCCATCTCCATGTCTGGGCTTCTCCTGAAGAGGCTGGTGAATTCCCTTATGCTCCCGGACATGAGCCCTATTTACCAGGAAATATCGATTTTTTGCTCCAGAGTTTGGAGGAGGCAGGAGTAGATGGCACTCTCATTGTGCAGCCAATAAATCATAAATATGATCATAGTTATGTCACAAGCGTTCTGAAGAAATACCCGACCAAATTTGTTGGTTGTTGCCTTGCTAATCCATCTGATGATGGAAGTGGGCTTAAGCAGTTTGAAGATCTTGTCTTAAAGGATGGTTATCGTGCCGTTCGATTCAATCCAGAATTGTGGCCATCTGGGGAAAAGATGACAAATGAAATTGGGAAGGTAATTTTCCAAAGGGCCGGAGAACTCAATGTATCAGTGGCCTTCTTGTGTATGAAGGGACTTAGTCCATATATTTATGAAATTGAGCAGTTGTGCACAGAATTTCCATCAACAGTTGTATTGCTCGATCACTTAGCCTTCTGCAAACCACCATTAAATGAAGAGGAAGGTCTCGTCTTTTCTCAGTTTTTGAATCTATCTAGATTCCCACAAGTATATGTGAAATTTAGTGGCTTTTTCAGAGTGTCAAGAGAGCAGTTTCCTTATCTGGATTTGTCTCCTGTCTTGTCCCAAGTTGTCTCTAGCTTTGGTGCTAACCGTGTTATGTGGGGCACTGATTTTCCATATGTTGTTCCCGAATGTGGGTACAAAGAAGCCAAAGAAGCTATGCATCTTATAGCCAACCAGATCTCTTTGCCTTCTACTGATTTAGAGTGGATCATGGGGAGAACGGTCAAGCAACTCTTCCCAGACCAATGGACTGCTGCTAGTGCTGAGAAAGGTTCTAACTGA 918 0.4303 MASPFTQTLSTSKVIDSHLHVWASPEEAGEFPYAPGHEPYLPGNIDFLLQSLEEAGVDGTLIVQPINHKYDHSYVTSVLKKYPTKFVGCCLANPSDDGSGLKQFEDLVLKDGYRAVRFNPELWPSGEKMTNEIGKVIFQRAGELNVSVAFLCMKGLSPYIYEIEQLCTEFPSTVVLLDHLAFCKPPLNEEEGLVFSQFLNLSRFPQVYVKFSGFFRVSREQFPYLDLSPVLSQVVSSFGANRVMWGTDFPYVVPECGYKEAKEAMHLIANQISLPSTDLEWIMGRTVKQLFPDQWTAASAEKGSN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00562 305 SUPERFAMILY Metallo-dependent hydrolases 14 291 IPR032466 -
Pumo5g00562 305 Gene3D - 5 294 - -
Pumo5g00562 305 Pfam Amidohydrolase 15 286 IPR006680 GO:0016787
Pumo5g00562 305 PANTHER 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE 12 296 IPR032465 GO:0016831
Pumo5g00562 305 FunFam Catalytic/ hydrolase 3 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00562 Pumo-Chr5 11342343 11346305 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00562 - - gmx:100817481 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00562 5 11342343 11346305 Pumo5g00562 5 11342343 11346305 ECH