Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00558 ATGAGGCAAGAGAACATAATGCATTACCAAGTGGAGCCTGCTGCATGGAGCTACTACATGAGGGTTCGGAGGAGCATGGAAGAGGACCAAATGGAGAGAGTGGCTCGGCTGGCCTCTCAGAGTGCTGTGGTGATCTTCAGTGTGAGTAGCTGTTGCATGTGCCATGCAATGAAGAGGCTCTTCTGTGGCATGGGGGTTAACCCCACAGTGCATGAGCTGGACCAAGACCCCAAAGGGAAAGACATGGAGAGAGCACTCATGAGGCTCCTTGGAAATGGAATCAGCTCCACTCCTGCTGTTCCTGTCGTCTTCATTGGAGGGAAGCTCGTTGGCTCAATGGACAGGGTTTTGGCTTTCCACATCAGTGGCACCCTTGTTCCTCTTCTCAAACAAGCTGGTGCCTTGTGGCTTTGA 414 0.5242 MRQENIMHYQVEPAAWSYYMRVRRSMEEDQMERVARLASQSAVVIFSVSSCCMCHAMKRLFCGMGVNPTVHELDQDPKGKDMERALMRLLGNGISSTPAVPVVFIGGKLVGSMDRVLAFHISGTLVPLLKQAGALWL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00558 137 FunFam Glutaredoxin family protein 31 136 - -
Pumo5g00558 137 PANTHER GLUTAREDOXIN 31 137 IPR011905 -
Pumo5g00558 137 Pfam Glutaredoxin 43 110 IPR002109 -
Pumo5g00558 137 Gene3D Glutaredoxin 24 136 - -
Pumo5g00558 137 SUPERFAMILY Thioredoxin-like 31 136 IPR036249 -
Pumo5g00558 137 NCBIfam glutaredoxin-like family 34 137 IPR011905 -
Pumo5g00558 137 CDD GRX_GRXh_1_2_like 42 128 - -
Pumo5g00558 137 ProSiteProfiles Glutaredoxin domain profile. 31 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00558 Pumo-Chr5 11320428 11320841 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00558 7 137 Miscellaneous Gene Families AT3G02000 57.971 7.47e-44 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00558 K03676 - gmx:100797942 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00558 5 11320428 11320841 Pumo5g00558 5 11320428 11320841 ECH