Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00364 ATGCAAACTCCTGAAGGTGATGCTCTGTTCGCGTTCAGAAGAGCTGTGAAAGACCCAAATAACGTTCTACAGAGCTGGGATCCAACTTTGGTGGATCCTTGTACATGGTTCCATGTTACCTGTGATGATGATAAGCGAGTTACCCGACTAGACCTCGGACACGCAAAACTGTCTGGCCATTTGGTTCCAGAGCTAGGGAGGCTCCAGCGCCTTCAGTTTCTAGAACTGTACAAGAATGATTTGATGGGTCCAATACCAAAAGAACTTGGAGACCTCAAGAACCTGGTTAGCTTGGGTCTCTACCAGAATAACCTAACTGGCTCCATCCCCGCCACGCTGTCCAACCTCTCCAACATCAAATTCTTGCGACTCAACAGCAACAAGCTCACTGGAAGAATACCGAGGGAACTCACTAAGTTGGGAAACCTCAAGATCTTAGACCTATCAAACAATGATCTATGTGGTACTTTCCCGACATCCGGCTCCTTTTCCAAGTTCTCCGAAGAAAGTTTCAAGAATAATCCAAGACTTAAAGGACCAGAATTAATGGGATTCGTCAGATATGATACTGGAGAAAGCTGCAAATGA 588 0.4575 MQTPEGDALFAFRRAVKDPNNVLQSWDPTLVDPCTWFHVTCDDDKRVTRLDLGHAKLSGHLVPELGRLQRLQFLELYKNDLMGPIPKELGDLKNLVSLGLYQNNLTGSIPATLSNLSNIKFLRLNSNKLTGRIPRELTKLGNLKILDLSNNDLCGTFPTSGSFSKFSEESFKNNPRLKGPELMGFVRYDTGESCK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00364 195 Gene3D Ribonuclease Inhibitor 3 184 IPR032675 -
Pumo5g00364 195 Pfam Leucine rich repeat N-terminal domain 5 42 IPR013210 -
Pumo5g00364 195 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 5 167 - -
Pumo5g00364 195 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Pumo5g00364 195 SUPERFAMILY L domain-like 5 166 - -
Pumo5g00364 195 FunFam Somatic embryogenesis receptor kinase 1 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00364 Pumo-Chr5 8507045 8509151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00364 5 180 Receptor kinase-like Gene Family AT1G71830 61.932 1.18e-70 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00364 - - gmx:100778819 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00364 5 8507045 8509151 Pumo5g00364 5 8507045 8509151 ECH