Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00275 ATGTCTAACCCCAAATCTTATGCTGACATTCCCATTTTGGACCTTTCTCAGCCATTGCAGCCATCTTCTCTATCCTCTCTCAATAATGCAAGCAAAGATTGGGGTTTTTTCCACATAATCAACCATGGAATCTCCAAAGATCTTTGCAGCCAGATCCAGTCACTATCCAAACACCTCTTCAGCCTCCCTTCTGATACCAAACTTAGACTTGGTCCTTTCTCATCTTTAAAATCTTACACCCCTCATTTCATTGCCTCTCCATTCTTTGAGAGCCTCCGAGTTAATGGACCCAACTTTTATGTTTCTGCTAATAGTTTTGCTGAAATCCTCTTTGACAAAAAGGACTCCAAATTCAGTGTGATAATGCAAGAATATTGCAGTAAGATGGAAGATTTGTCTAAGAGAATTCTAAAGATTGTGTTGATGAGCTTAGGGGATGGCATTGAGAAGAAGTTTTATGATTCTGAGTTCAAGAAGTGCCATGGTTACTTGAGGATAAACAATTACTCAGCCCCAGAAATTATAGAAGATCTAGTTGAGGGGCTTGGGATGCACACTGATATGAGTTGTATAACTATCTTATATCAAGATGAGATAGGAGGGCTTCAAGTGAGATCAAATGATGAGGGAGAGTGGATAGATATAAGCCCATCTGAGGGAACCCTAGTGGTGAACATAGGGGATATGTTGCAAGCTTGGAGCAATGACAAACTAGCATTCTTCTGGTGCTTTGAGGATGACAAGGTGATTTTGGCACCAGATGAAGTTGTTGGAGAAGGGAACAAGAGGAAGTACAAACCATTTGTGTGCTTGGACTATTTGAAATTTAGAGAGAATAATGAAAAAGGAAGATTTGATAAGTTGAAATACTACTGCTAG 879 0.397 MSNPKSYADIPILDLSQPLQPSSLSSLNNASKDWGFFHIINHGISKDLCSQIQSLSKHLFSLPSDTKLRLGPFSSLKSYTPHFIASPFFESLRVNGPNFYVSANSFAEILFDKKDSKFSVIMQEYCSKMEDLSKRILKIVLMSLGDGIEKKFYDSEFKKCHGYLRINNYSAPEIIEDLVEGLGMHTDMSCITILYQDEIGGLQVRSNDEGEWIDISPSEGTLVVNIGDMLQAWSNDKLAFFWCFEDDKVILAPDEVVGEGNKRKYKPFVCLDYLKFRENNEKGRFDKLKYYC 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00275 292 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 72 IPR026992 -
Pumo5g00275 292 SUPERFAMILY Clavaminate synthase-like 5 279 - -
Pumo5g00275 292 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 238 - -
Pumo5g00275 292 Gene3D - 1 276 IPR027443 -
Pumo5g00275 292 Pfam 2OG-Fe(II) oxygenase superfamily 165 238 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00275 Pumo-Chr5 6242348 6243905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00275 9 238 Glycosyltransferase AT5G59530 29.461 7.80e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00275 - - gmx:100812108 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00275 5 6242348 6243905 Pumo5g00275 5 6242348 6243905 ECH
Pumo5g00275 5 6242348 6243905 Pumo7g00841 7 14891765 14892937 PCT