Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00274 ATGGATAAATCATCCAACTTTGATGAAAATTCTGATGTGGGGTATCATCACCCTTCACCTTCCAATACTCCTGCTTTCTCCACAATGAGTGGAGAATCTTTTGCATATTGCCAAACTTGGACAAGCTCAGAGTCTGAGACTGTTGATGAGAGCAGCTATGCCAGTGAACCTTCACCTTCTCGGTGGAGGGCTAAACAGGATGTTCTTTCAAAGCTAGGAATGAAGCTGCGCAAGCATTCAATGGATGATAAACTTGGTGCCTCTGAGGATGCAGCAGCCGAGTTTGAATTGATGAAGGAAAGATTTTCAAAGCTTCTGCTGGGAGAAGACATGTCTGGTAGTGGGAAAGGTGTTTGCACTGCTATTACAATCTCAAATGCCATTACCAATCTCTATGCAACTATATTTGGACAAAGTTTAAAGTTGGAACCACTCAAGCCAGAGAAGAAGGCCATGTGGAAGAGGGAAATGAAGGTTCTCTTATCAGTGTGTGATTACATACAAGAATTTGCTCCAACAGCACAATATTTAGAAGATGGCACAATTGTGGAGATGATGAAAAGCAGGCCAAGGTCAGACATCTATGTCAACCTCCCTGCACTGCAGAAGCTTGACACAATGCTCATAGAAATATTAGATACTTTCCAGGACACTGAATTTTGGTATGCAGAGAACATACCAGGGAATTCGAGTCGATTGCGAGGGGCATCATTTCGAAAAATTGTTCCAAGGAAAGATGAGAAATGGTGGCTGCCAGTTCCTTGTGTTCTTCCTGGTGGCCTCTCTGACAAGTCAAGAAAGCACCTGATAGAGAAAAGGGATTGTGCTAATCAAATTCATAAAGCTGCCATGGCAATAAACAGCAATGTTCTTACAGAAATAGATATCCCAGAAACATACATAGATAATCTTCCCAAGCTGAAATTCTATTGCCAAGTGATTGAGGATTCCATTAAATGTGACCCCATAAAGCAAATGTCTTGGAATTTTTCATCAAATTTCATAAGCCTTTTATGGAAGCCAATAATAGCAGCTGAGTCTTGTAGAAAACGGGATGATATAGTTTCAATTAAGAGTGGAAGATCAAGTGTAGGGGACTCAATTTACCACTACATGCATACTGCAGACAAGTTCTCACCTGAACAACTACTTGGACTGTCTCAAAATAAGTTCTGA 1176 0.4099 MDKSSNFDENSDVGYHHPSPSNTPAFSTMSGESFAYCQTWTSSESETVDESSYASEPSPSRWRAKQDVLSKLGMKLRKHSMDDKLGASEDAAAEFELMKERFSKLLLGEDMSGSGKGVCTAITISNAITNLYATIFGQSLKLEPLKPEKKAMWKREMKVLLSVCDYIQEFAPTAQYLEDGTIVEMMKSRPRSDIYVNLPALQKLDTMLIEILDTFQDTEFWYAENIPGNSSRLRGASFRKIVPRKDEKWWLPVPCVLPGGLSDKSRKHLIEKRDCANQIHKAAMAINSNVLTEIDIPETYIDNLPKLKFYCQVIEDSIKCDPIKQMSWNFSSNFISLLWKPIIAAESCRKRDDIVSIKSGRSSVGDSIYHYMHTADKFSPEQLLGLSQNKF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00274 391 FunFam Rop guanine nucleotide exchange factor 14 87 319 - -
Pumo5g00274 391 ProSiteProfiles PRONE domain profile. 85 391 IPR005512 GO:0005085
Pumo5g00274 391 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 94 307 IPR005512 GO:0005085
Pumo5g00274 391 Gene3D PRONE domain, subdomain 1 86 327 - -
Pumo5g00274 391 MobiDBLite consensus disorder prediction 11 28 - -
Pumo5g00274 391 MobiDBLite consensus disorder prediction 1 28 - -
Pumo5g00274 391 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 32 384 IPR038937 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00274 Pumo-Chr5 6228410 6232355 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00274 - - gmx:100806086 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00274 5 6228410 6232355 Pumo5g00274 5 6228410 6232355 ECH
Pumo5g00274 5 6228410 6232355 Pumo7g00836 7 14848903 14851247 PCT