Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00265 ATGGCTTCACTTGGAGCTACCTCTGCTGTGTGCTGTTCTGTGTTCATGATGCTTGTTGCTTTGAGTTTGGCTGGGGATATAGTGCACCCTGATAATATTGCTCCCAGAAGACCTGGCTGTGACAACAACTTTGTCCTGGTTAAAGTCCCAACTTGGATTGATGGTGTGGAAAGCTGTGAGTATGTTGGTGTTGGTGCAAGATTTGGCCCTACGTTAGAATCTAAAGAAAAGCATGCTAACCATACTAGAGTTGCAATTGCAGACCCTCCTGATTGTTGTAGCAAGCCTAAGAATAAGCTCACTGGCGAGGTCATTTTGGTGCACCGAGGACAATGTAGTTTCACAATCAAGGCAAATATAGCTGAAGAAGCTGGTGCTTCAGCCATCCTCATTATAAATTATCGTACAGAACTTTTCAAGATGGTTTGTGAAGCGAATGAAACTGATGTTGATATTGGAATTCCTACTGTCATGCTTCCTCAAGATGCTGGTGAAAACTTGAAAAATCACATACTAAACAAGTCAGCAGTGTCTGTGCAGTTGTATTCTCCACTGCGGCCATTGGTTGATGTTGCAGAAGTGTTTTTATGGCTTATGGCTGTTGGTACCATTCTCTGTGCTTCTTACTGGTCTGCCTGGACTGCGAGAGAGTCTGCTGTTGAGCAGGAGAAGCTATTAAAGGATGCTTCAGATGAATATGTAAATACAGAGAATGCTGGTTCTAGTGCTTATGTGGAAATCAGTACTGCAGCAGCAATATCATTTGTTGTGATTGCTTCTTGTTTCTTGGTTATGCTTTACAAATTAATGGCATCATGGTTTGTTGAAGTTCTAGTGGTTCTATTTTGCATTGGTGGGGTTGAGGGACTACAAACTTGCTTGGTGGCTCTGTTATCATGTTTCAGATGGTTCCAGCATGCTGCACAAACATTTGTGAAAGTACCCTTCTTTGGTGCTGTATCATATCTGACAGTTGCTGTTACTCCCTTCTGCATAGTGTTTGCTGTGCTTTGGGGAGTTTATCGCCGTGTATCATTTGCTTGGATTGGTCAAGATATTCTTGGCATCACATTGATAATTACAGTTCTTCAGATTGTGCGGATACCAAATCTCAAGGTTGGAACTGTTCTTCTCAGTTGTGCCTTCCTATACGACATCTTCTGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGAGGTGATAGGAGTGGAGAAGATGGTATACCCATGCTACTCAAGATACCACGTTTGTTTGATCCTTGGGGTGGTTACAGCATCATTGGTTTTGGGGACATCATCTTACCAGGGCTTCTAGTAGCATTTTCACTAAGGTATGATTGGTTAGCAAAGAAGAACCTTCGAGATGGATACTTCTTGTGGGCAATGACTGCTTATGGTTTAGGTCTCCTTATCACATACGTGGCTTTGAACTTGATGGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTGGAACCTTTTTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGGTTTTATGGACAAGAGGGGAACCAAAAATACCTTGCCCTCACATCCAAGAGGATGATCAATCAACAAACCAGTAA 1623 0.4251 MASLGATSAVCCSVFMMLVALSLAGDIVHPDNIAPRRPGCDNNFVLVKVPTWIDGVESCEYVGVGARFGPTLESKEKHANHTRVAIADPPDCCSKPKNKLTGEVILVHRGQCSFTIKANIAEEAGASAILIINYRTELFKMVCEANETDVDIGIPTVMLPQDAGENLKNHILNKSAVSVQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTARESAVEQEKLLKDASDEYVNTENAGSSAYVEISTAAAISFVVIASCFLVMLYKLMASWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFQHAAQTFVKVPFFGAVSYLTVAVTPFCIVFAVLWGVYRRVSFAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDRSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKNLRDGYFLWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKVLWTRGEPKIPCPHIQEDDQSTNQ 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00265 540 PANTHER SIGNAL PEPTIDE PEPTIDASE 69 532 IPR007369 GO:0004190|GO:0016020
Pumo5g00265 540 Pfam Signal peptide peptidase 243 523 IPR007369 GO:0004190|GO:0016020
Pumo5g00265 540 Pfam PA domain 90 167 IPR003137 -
Pumo5g00265 540 FunFam Signal peptide peptidase-like 3 46 185 - -
Pumo5g00265 540 Gene3D - 42 184 - -
Pumo5g00265 540 Coils Coil 219 239 - -
Pumo5g00265 540 SMART psh_8 243 512 IPR006639 GO:0004190|GO:0016020
Pumo5g00265 540 SUPERFAMILY PA domain 99 139 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00265 Pumo-Chr5 6119257 6126060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00265 41 181 Miscellaneous Gene Families AT2G30290 28.667 9.41e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00265 K09597 - gmx:100808921 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00265 5 6119257 6126060 Pumo5g00265 5 6119257 6126060 ECH
Pumo5g00265 5 6119257 6126060 Pumo7g00817 7 14341119 14348822 PCT