Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00263 ATGGCTCTGGGAGGTTTGGTTTCCAACAGAAACTTCACTTCTTTCATTGGACCAGGAAGTGTATATCAATTGGGAAAGGATCTATCACCTCAAAGAGGGGGCATTTCTTGTGTATATGTTGCACGCTATGGTGGCCAGATTGGAAAGGATCCTTTTTCAAGATCCTGGCATGGAATGTCTTTTCATGAAAAAGAACCTTTGAATGAGAGAGTTTCAAAACGAATACTAACATTTCAGGATGAAGTGCAGCATTGTTCTCTACTATCCCAGAAATCCATTCACTGCATGAACATGAAACTTAAGGCCAGCAGAAGATGTCAGTGCTTCCTCTCTTCAGATCCCTATAGCAGTAGCCTTATTCAACAAAGAGCAGTGTATGGACTAGGTTTAAACAAACTTGGCAAGGCAAATACGGCTCGTGTTCATTACAAGTCTGAGGAGTATGATATTACAGAAACGGAGGTGGATCCTCTGGCATCAACCGAAGGGACAGGTGAAGCCATTCTCATGGAAGGAAATGTTCCACAAGTATCTTTTTGGTGGCAGCAGTTTCCCAAGCGCTGGGTTATTGTGTTGCTATGTTTTGCAGCATTTCTTCTGTGCAACATGGACCGTGTGAATATGAGCATAGCAATACTTCCAATGTCACAAGAGTTTAATTGGAACAGTGCAACAATCCTTGGTGGCATATGGGCAGACAAACTTGGTGGGAAGCTAGTGCTAGGATTTGGAGTTGTCTGGTGGTCAATGGCAACAGTTTTAACACCTATTGCTGCAAGAATTGGGCTCCCTTGTTTGCTTATTATGCGTGCCTTTATGGGGATTGGTGAGGGTGTTGCCATGCCCGCTATGAATAATATGCTTTCCAAGTGGATTCCAGTTTCAGAGAGAAGCAGATCACTTGCCCTAGTATATAGTGGCATGTACCTTGGTTCTGTGGTTGGCTTGACATTCTCACCTTTGCTAATCCAAAATTTTGGGTGGCCATCAGTGTTTTACTCTTTTGGATCCCTTGGAAGTATCTGGTTTGCCTTGTGGCTGAGAAAGGCATATAGCTCCCCAAAAGATGACCCTGATCTTGGGGTAGAGGAGAAAAGGCTCATATTGGAAGGCAATGTATCAAATGCACCTGTTTCTTCCATTCCTGGGAAATTAATTTTATCAAAAGCACCTGTTTGGGCTCTTATAATCTCCCACTTCTGTCACAATTGGGGGACATTTATTCTTTTAACCTGGATGCCTACTTACTATAATCAGGTTCTGAAGTTCAACCTCACCGAATCTGGGCTCTTATGTGTTCTTCCATGGTTAACCATGGCTGCCTTTGCAAATATTGGTGGGTGGATTGCTGACACACTAGTGAGAAAAGGCCTTTCCATAACAGTTGTTCGAAAGATCATGCAATCAATCGGGTTTCTGGGTCCTGCCTTTTTTCTTTCACAGTTGAGCCATGTCAGAACACCTGCCATGGCTGTACTGTGCATGGCGTGTAGTCAGGGATCTGATGCATTCTCACAATCTGGTCTGTATTCCAATCACCAAGACATTGGACCACGCTATGCTGAGTGCTTGCTGGTGTCTTTGGTACAGCTGCAACTGGATTCATACTCCTGCGAGGTTCTTGGAATGATGTTTTTAAGGTTGTTGTTGCACTGCACATAA 1662 0.4368 MALGGLVSNRNFTSFIGPGSVYQLGKDLSPQRGGISCVYVARYGGQIGKDPFSRSWHGMSFHEKEPLNERVSKRILTFQDEVQHCSLLSQKSIHCMNMKLKASRRCQCFLSSDPYSSSLIQQRAVYGLGLNKLGKANTARVHYKSEEYDITETEVDPLASTEGTGEAILMEGNVPQVSFWWQQFPKRWVIVLLCFAAFLLCNMDRVNMSIAILPMSQEFNWNSATILGGIWADKLGGKLVLGFGVVWWSMATVLTPIAARIGLPCLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLALVYSGMYLGSVVGLTFSPLLIQNFGWPSVFYSFGSLGSIWFALWLRKAYSSPKDDPDLGVEEKRLILEGNVSNAPVSSIPGKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAAFANIGGWIADTLVRKGLSITVVRKIMQSIGFLGPAFFLSQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAECLLVSLVQLQLDSYSCEVLGMMFLRLLLHCT 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00263 553 FunFam ascorbate transporter, chloroplastic isoform X1 379 530 - -
Pumo5g00263 553 Gene3D MFS general substrate transporter like domains 379 519 IPR036259 -
Pumo5g00263 553 PANTHER SOLUTE CARRIER FAMILY 17 181 522 - -
Pumo5g00263 553 Gene3D MFS general substrate transporter like domains 185 358 IPR036259 -
Pumo5g00263 553 FunFam ascorbate transporter, chloroplastic isoform X2 185 358 - -
Pumo5g00263 553 Pfam Major Facilitator Superfamily 224 518 IPR011701 GO:0022857|GO:0055085
Pumo5g00263 553 SUPERFAMILY MFS general substrate transporter 180 520 IPR036259 -
Pumo5g00263 553 CDD MFS_SLC17A9_like 191 521 IPR044777 -
Pumo5g00263 553 ProSiteProfiles Major facilitator superfamily (MFS) profile. 160 553 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00263 Pumo-Chr5 6091237 6096715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00263 1 525 Organic Solute Cotransporters AT4G00370 66.421 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00263 K08193 - gmx:100784401 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00263 5 6091237 6096715 Pumo5g00263 5 6091237 6096715 ECH
Pumo5g00263 5 6091237 6096715 Pumo7g00814 7 14299793 14306059 PCT