Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00236 ATGAAGCCATTCATGTCCACCATGAACCAGAACAACAACAACAACCTCAAAGATTCAGAACACTTCCACTCATCATGGACCATAGCAAAACTAATGACCTCCTTCTTCCTCTTAGTCTCCATCTCCTACCTCTTCTACTCCCTTGGATTCATCACACATTCATATGATTGCCCTCAAAAAAAGCCTTACCCTCTTCCCACCACCACACACTTTTCTAACAACACTGCTCTTTCCCCATCTCAACAACCCCACAAAACAACACCCTTTGAGGAGAAAACCAACATTTCCCACTTAGTGTTTGGCATAGCAGCCTCATCCAACCTATGGAACCATAGAAAAGAGTACATCAAACTATGGTGGAGGCCAAATGAGACAAGGGGCAACGTGTGGCTAGACCAAGAAGTGAAAACTGAACCCGGTGATATGCACCTTTTACCAACACTGAAAATATCCGGTGATGTCTCAAAGTTCAAGGTGAAGAATCCACGTGGGGACAGGTTGGGGGTTCGAATCTCTCGCATAGTGTCGGAGACAGTGAGGCTTGTTGGGAAGGAGAAGAATGTGAGGTGGTTTGTGATGGGGGATGATGACACTTTCTTTGTGACTGAGAATTTGGTGAAGGTGTTGCAAAAATATGATCACAACCAGTTCTATTATATTGGGACCAATTCAGAGAGCCACTTGCAGAACATTCATTTTTCTTATAACATGGCTTATGGGGGTGGAGGGTTTGCAATTAGTTACCCTTTGGCTATGGCATTGGAGAGAATGCAGGATAAGTGCATTCAGAGGTACCCTGCATTGTTTGGCTCAGATGATAGGATTCAGGCTTGTATGGCAGAGCTTGGTGTCCCTCTCACCAAGGAGATTGGCTTCCACCAGTTTGATGTATACGGCAACGTGTTCGGCCTCCTAGCAGCACATCCCATCACACCCCTCGTTTCCATGCACCACTTGGACGTAGTTGATCCAATATTTCCAAACGTGAACCGCGTGGAGGCCCTGCAGCGGCTAATTGGGCCCATGAAACTGGACTCGTATGGGCTCATGCAACAGTCCATATGCTACGACAAAGCCCGGCGTTGGACAATATCCGTGTCATGGGGCTACGCGGTTCAAATATTCCGGGGCATTTTCCTGGCCCGGGACATGGAGATGCCGGCAAGAACCTTCTTGAATTGGTACCGGCGGGCAGATTATACAAGTTTTCCGTTCAACACGCGCCCTTTCAGCCGGAATGTTTGCCAGAAACCTTTTGTTTTTTACTTGTCCAATGCAACCTTTGATGGAGTTGGTGATGAAACCGTGAGTGAATATATTCGGGTTCAGCCCAACCCGGAGTGCAATTGGAAAATGGTGGATCCGACCCAAATCCAAGTAATAAAGGTTCTTAAGAAACCCGACCCGCATTTGTGGGACAAGTCTCCTAGAAGAAATTGTTGCAGGGTTCAACCGACAAAGGAAGAAGGAACTCTAGTGATTGACGTGGGAGAATGCAGAAAAGATGAATTTGCTCATAAATAG 1524 0.4659 MKPFMSTMNQNNNNNLKDSEHFHSSWTIAKLMTSFFLLVSISYLFYSLGFITHSYDCPQKKPYPLPTTTHFSNNTALSPSQQPHKTTPFEEKTNISHLVFGIAASSNLWNHRKEYIKLWWRPNETRGNVWLDQEVKTEPGDMHLLPTLKISGDVSKFKVKNPRGDRLGVRISRIVSETVRLVGKEKNVRWFVMGDDDTFFVTENLVKVLQKYDHNQFYYIGTNSESHLQNIHFSYNMAYGGGGFAISYPLAMALERMQDKCIQRYPALFGSDDRIQACMAELGVPLTKEIGFHQFDVYGNVFGLLAAHPITPLVSMHHLDVVDPIFPNVNRVEALQRLIGPMKLDSYGLMQQSICYDKARRWTISVSWGYAVQIFRGIFLARDMEMPARTFLNWYRRADYTSFPFNTRPFSRNVCQKPFVFYLSNATFDGVGDETVSEYIRVQPNPECNWKMVDPTQIQVIKVLKKPDPHLWDKSPRRNCCRVQPTKEEGTLVIDVGECRKDEFAHK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00236 507 Gene3D - 85 334 - -
Pumo5g00236 507 FunFam Fringe-related protein-like 85 343 - -
Pumo5g00236 507 Pfam Protein of unknown function, DUF604 229 481 IPR006740 -
Pumo5g00236 507 PANTHER FRINGE-RELATED 26 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00236 Pumo-Chr5 5763288 5768316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00236 30 503 Glycosyltransferase AT4G23490 60.563 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00236 - - gmx:100777888 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00236 5 5763288 5768316 Pumo7g00794 7 14016055 14021122 PCT