Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00222 ATGAAGAAGTTTGTACTCAAGTTAGATTTGCTAGATGACAAGGCAAAGCAGAAGGCCCTGAAAACTGTTTCAACACTTTCAGGGATTGATGCCATCTCTATGGACATGAAAGAGAAGAAATTAACAGTGATAGGAACAGTTGATCCAGTGAATGTGGTGAGCAAGCTTCGCAAGTATTGGCCAACAGACTTACTCTCAGTAGGCCCAGCAAAGGAGCCTGAGAAGAAAGAGGAGCCAAAGAAGGAAGAGCCAAAGAAGGAGGAAGAGAAGAAAGAGGAGCCAAAGAAGGAGGGGGAAGCCAAAAAGGAAGAGGAGAAAAAGGAAGAGCCTAAGAAAGAAGAGAAGAAGGAAGAGCCAAAGAAAGAGGAAGAGAAGAAAGAAGAGGAGAAGAAGAAAGAGGCACCACCCCCACCCCCAGACCCAGTTTTAGAGCTGGTCAAGGCTTATAGGGCTTATAACCCCCACATGACCTCATACTACTATGTTCAAAGCATGGAAGAGAATCCCAATGCTTGTGTCATTTGTTAA 528 0.4451 MKKFVLKLDLLDDKAKQKALKTVSTLSGIDAISMDMKEKKLTVIGTVDPVNVVSKLRKYWPTDLLSVGPAKEPEKKEEPKKEEPKKEEEKKEEPKKEGEAKKEEEKKEEPKKEEKKEEPKKEEEKKEEEKKKEAPPPPPDPVLELVKAYRAYNPHMTSYYYVQSMEENPNACVIC 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00222 175 MobiDBLite consensus disorder prediction 66 143 - -
Pumo5g00222 175 Coils Coil 111 132 - -
Pumo5g00222 175 Gene3D - 1 72 - -
Pumo5g00222 175 MobiDBLite consensus disorder prediction 69 137 - -
Pumo5g00222 175 Pfam Heavy-metal-associated domain 10 58 IPR006121 GO:0046872
Pumo5g00222 175 Coils Coil 86 106 - -
Pumo5g00222 175 ProSiteProfiles Heavy-metal-associated domain profile. 1 68 IPR006121 GO:0046872
Pumo5g00222 175 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00222 Pumo-Chr5 5443364 5445587 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00222 - - gmx:100527231 109.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00222 5 5443364 5445587 Pumo5g00222 5 5443364 5445587 ECH
Pumo5g00222 5 5443364 5445587 Pumo7g00770 7 13536586 13539270 PCT