Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00206 ATGCGTGTGGGTTTGGGTGTTAAGGTGTCGTTGGGTGTGATTGGTGTGAGTCTGATATTTGCAGTGCTGAAAATGTCGCAGTTGTTGGACAAAGCCAAAAACTTTGTTTCGGACAAAGTTGCCAACATGCCCAAGCCCGAGGCGAGTATCACCGACGTCGATTTCAAGCGCGTGGGCCGCGACGGCGTCCAGTACTTGGCCAAGGTTTCTGTTTCCAACCCTTATTCCACTCCCATTCCCATTTGTGAGATCAAGTACTCTCTCAAAAGTGCTGGCAGGGAGATAGCATCAGGGACAATACCAGACCCAGGGTCGTTGAAGGCAAGTGACACTACAATGTTGGATGTGCCAGTGAAGGTGCCTCATAGCATATTACTGAGCTTGGCAAAGGACATTGGTGCAGATTGGGACATTGATTACCAATTGGATCTTGGTCTAGTTATTGACCTTCCCGTCGTTGGCAACTTCACCATTCCTCTTTCTCAGAAGGGAGAGGTCAAGCTCCCTACCCTCTCTGACATGTTTGCATAA 531 0.4896 MRVGLGVKVSLGVIGVSLIFAVLKMSQLLDKAKNFVSDKVANMPKPEASITDVDFKRVGRDGVQYLAKVSVSNPYSTPIPICEIKYSLKSAGREIASGTIPDPGSLKASDTTMLDVPVKVPHSILLSLAKDIGADWDIDYQLDLGLVIDLPVVGNFTIPLSQKGEVKLPTLSDMFA 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00206 176 SUPERFAMILY LEA14-like 25 174 - -
Pumo5g00206 176 Pfam Late embryogenesis abundant protein 68 164 IPR004864 -
Pumo5g00206 176 Gene3D - 41 175 - -
Pumo5g00206 176 FunFam Desiccation protectant protein Lea14-like 41 175 - -
Pumo5g00206 176 SMART why 48 165 IPR013990 GO:0009269
Pumo5g00206 176 PANTHER - 26 172 IPR045043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00206 Pumo-Chr5 5132063 5134313 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00206 - - gmx:547837 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00206 5 5132063 5134313 Pumo5g00206 5 5132063 5134313 ECH
Pumo5g00206 5 5132063 5134313 Pumo7g00754 7 12743914 12745392 PCT