Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00164 ATGTCTCTGAGATTCAACAATCGAAGAATCGTTCTCGCTCTTCGCATTTTCCTTCTCTTCTCCTTATTCTTCAGCCTCTCACCAACCTTCGCTCAGGATTCTCTCGCTCAGAACGCGAAGGAAGATTCAGGCGGATCTGTGGATCTCGGTCGCCGCGGCAAAATTGCATTGAATGCTATAGAGAATGATTCGATCCTTTCTCTTGGCTTGGACTCCACCGGTCCTGGAATCTTCGATGCATTTTTCGCAAGTCTATCCATGATCATTGTCAGTGAGATTGGGGATGAGACCTTTATAATAGCAGCTCTTATGGCTATGCGCCACCCTAAGTCAATTGTCTTGTCCGGTGCGCTCAGTGCTCTGATTATAATGACAGTACTTTCTACGGGGCTAGGCAGGATTGTGCCAAATTTGATTTCTAGGAAGCATACAAATAGTGCTGCTACAGTTCTTTATGCTTTCTTTGGGTTAAGGTTACTGTACATTGCATGGAGATCATCAGATTCAAAATCCTCACAGAAGAAAGAAATGGAAGAAGTTGAAGAAAAACTGGAAGGTGGACAAGGGAAAACTTCAGTTCGGCGCTTCTTTTCAAGATTTTGTACACCAATATTTTTGGAGTCTTTTATTTTAACATTCCTTGCTGAGTGGGGTGATCGTAGCCAGATAGCGACAATTGCACTGGCGACCCACAAAAATGCAATTGGAGTAGCAGTTGGGGCCACTATAGGACACACCATCTGTACCTCTCTGGCAGTGGTGGGAGGAAGCATGCTGGCATCTAAGATTTCCCAACGCTCAGTAGCCACTGTTGGTGGCTTGCTCTTCCTCGGCTTTTCCGTATCTTCATACTTCTACCCGCCTCTATGA 870 0.4529 MSLRFNNRRIVLALRIFLLFSLFFSLSPTFAQDSLAQNAKEDSGGSVDLGRRGKIALNAIENDSILSLGLDSTGPGIFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALSALIIMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSSDSKSSQKKEMEEVEEKLEGGQGKTSVRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQRSVATVGGLLFLGFSVSSYFYPPL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00164 289 Coils Coil 170 190 - -
Pumo5g00164 289 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 59 286 IPR001727 -
Pumo5g00164 289 Pfam Uncharacterized protein family UPF0016 83 156 IPR001727 -
Pumo5g00164 289 Pfam Uncharacterized protein family UPF0016 207 279 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00164 Pumo-Chr5 4552285 4556146 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00164 K23541 - gmx:100785207 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00164 5 4552285 4556146 Pumo5g00164 5 4552285 4556146 ECH