Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00162 ATGAGACAAAGAATGGAAAGGCTTGTCATTCTTCCTTTCTCTGCTGGTTGCATCTCTGAGGCCAGTGTTGCTGTTGGTGTGCCACAGCCAAGAAGATCAAAACCAGACACCAATGCACCACCTCCTACAATAAAAAGGTCTAAAAGCGTCGAGGATTCAGAGATTTTGTCTGGTGAAAGCATGAAGAACTCGTTGAGGCTGCTAGATGTTGTTCCAAAGCCTAACCTATCCAACGGCTTCAATAGGCTGGTCAAGGGTTTCAAGAATTTTTCTCAATTGTTTGTGGAAAAAGATGAGTTTGAAGAAGTGAAAATAGACATGGAAATAGGGTGCCCAACAGATGTGCAGCATGTGACACACATTGGTTGGGATGGCATTGCAACTTCTGCTGCTGACCCCTCGAGGGGATGGGATACTCTCATTCCTCACGAGCTCCTCTCTCTATCCTCTCAATCTTTACAGAACCAAGAGCTCTCTAATTTGGACGCAAAAAATGAAACATCATCTCCCGTGAAGCCTTCTCCTAATTAG 531 0.4463 MRQRMERLVILPFSAGCISEASVAVGVPQPRRSKPDTNAPPPTIKRSKSVEDSEILSGESMKNSLRLLDVVPKPNLSNGFNRLVKGFKNFSQLFVEKDEFEEVKIDMEIGCPTDVQHVTHIGWDGIATSAADPSRGWDTLIPHELLSLSSQSLQNQELSNLDAKNETSSPVKPSPN 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00162 176 MobiDBLite consensus disorder prediction 156 176 - -
Pumo5g00162 176 Pfam P21-Rho-binding domain 108 144 IPR000095 -
Pumo5g00162 176 ProSiteProfiles CRIB domain profile. 109 122 IPR000095 -
Pumo5g00162 176 MobiDBLite consensus disorder prediction 28 55 - -
Pumo5g00162 176 SMART PBD_5 109 144 IPR000095 -
Pumo5g00162 176 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC2 1 168 IPR044509 -
Pumo5g00162 176 Gene3D CRIB domain 104 160 IPR036936 -
Pumo5g00162 176 CDD CRIB 107 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00162 Pumo-Chr5 4536628 4539003 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00162 - - gmx:100787187 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00162 5 4536628 4539003 Pumo5g00162 5 4536628 4539003 ECH