Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00161 ATGGCAGCTGCTTCTCCAATGGCAAGCCAACTCAAGTCCACCTTCACTAGGACTCTTGTTGCACCCAAGGGCCTCTCTGGCTCTTCACCACTCCACCTCTCCCCTTCTAGAAGGCAATTTAGCTTCACTGTTAAGGCTATTCAATCAGAGAAGCCAACCTATCAAGTGATTCAGCCAATCAACGGTGACCCCTTCATTGGAAGCCTCGAAACCCCAGTTACATCCAGCCCCTTGATCGCATGGTACTTGTCCAACCTCCCCGCATACAGAACCGCAGTGAGCCCACTACTGAGAGGGATCGAGGTGGGCCTGGCCCACGGGTACCTGCTCGTGGGCCCATTCGTGAAGGCCGGGCCTCTGAGGAACACCGAAATCGCCGGGCAAGCAGGCTCTCTCGCCGCAGGTGGGCTTGTGGTGATCCTCAGCATTTGCCTCACCGTCTATGGGATTTCGTCCTTCAACGAGGGTGACCCATCCACTGCCCCATCACTGACCTTAACGGGCCGCAAGAAGGAGCCCGATCAGCTCCAAACTGCTGATGGCTGGGCCAAGTTCACCGGAGGGTTCTTCTTCGGAGGCATTTCTGGGGTTATTTGGGCCTACTTCCTCCTCTATGTCTTGGACCTTCCATACTACATCAAGTGA 645 0.555 MAAASPMASQLKSTFTRTLVAPKGLSGSSPLHLSPSRRQFSFTVKAIQSEKPTYQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFVKAGPLRNTEIAGQAGSLAAGGLVVILSICLTVYGISSFNEGDPSTAPSLTLTGRKKEPDQLQTADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYIK 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00161 214 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC 2 214 IPR022980 -
Pumo5g00161 214 Pfam Photosystem I reaction centre subunit XI 56 208 IPR003757 GO:0009522|GO:0009538|GO:0015979
Pumo5g00161 214 FunFam Photosystem I reaction center subunit XI 51 214 - -
Pumo5g00161 214 Gene3D Photosystem I PsaL, reaction centre subunit XI 51 214 IPR036592 GO:0009522|GO:0009538|GO:0015979
Pumo5g00161 214 SUPERFAMILY Photosystem I reaction center subunit XI, PsaL 57 213 IPR036592 GO:0009522|GO:0009538|GO:0015979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00161 K02699 - gmx:100527240 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00161 5 4534062 4536001 Pumo5g00161 5 4534062 4536001 ECH