Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00147 ATGGCTCTGAATTTGTGTATCTCCCCTAAGTGTAAATGGGTTGCATCTCCTTCATTAGATAGTGCTTCTTCTTCTTCTTTGAGACCATCACTAGGGTCTTGTTTTGGTAACATAAACATTGCTAGTGTGAGTCTAGGCACCACTAGAAGTTTGAGTTTGAGGAGGAGTGGGAGTGGAAGTGGAAGTGTTAGTGTAAGATCTAGTTTGGAAACTGCGGGGCCCACAGTCACAGTGGGACAGGTCACTGAGGTAAACAAGGACACCTTCTGGCCGATCGTTAAGGCTGCCGGGGATAAAGCCGTTGTCCTAGACATGTACACACAATGGTGTGGACCTTGCAAAGTGATGGCTCCAAAGTTTCAAGAATTATCTGAGAAGTATCTGGATGTTGTCTTTCTAAAGCTTGATTGCAACCAAGAGAACAAGCCCTTGGCAAAAGAGCTGGGAATTAAAGTGGTTCCCACTTTTAAAATTTTGAAGGACAGCAAGGTTGTAAAAGAAGTTACTGGAGCTAAATACGATGATTTGCTTGATGCCATAGACAGTGTTCGATCTAGCTAA 561 0.4349 MALNLCISPKCKWVASPSLDSASSSSLRPSLGSCFGNINIASVSLGTTRSLSLRRSGSGSGSVSVRSSLETAGPTVTVGQVTEVNKDTFWPIVKAAGDKAVVLDMYTQWCGPCKVMAPKFQELSEKYLDVVFLKLDCNQENKPLAKELGIKVVPTFKILKDSKVVKEVTGAKYDDLLDAIDSVRSS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00147 186 ProSiteProfiles Thioredoxin domain profile. 61 185 IPR013766 -
Pumo5g00147 186 ProSitePatterns Thioredoxin family active site. 102 120 IPR017937 -
Pumo5g00147 186 PRINTS Thioredoxin family signature 101 109 - -
Pumo5g00147 186 PRINTS Thioredoxin family signature 149 160 - -
Pumo5g00147 186 PRINTS Thioredoxin family signature 109 118 - -
Pumo5g00147 186 PANTHER THIOREDOXIN-LIKE PROTEIN 1 80 181 - -
Pumo5g00147 186 CDD TRX_family 87 181 - -
Pumo5g00147 186 Gene3D Glutaredoxin 66 185 - -
Pumo5g00147 186 SUPERFAMILY Thioredoxin-like 76 183 IPR036249 -
Pumo5g00147 186 Pfam Thioredoxin 81 181 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00147 Pumo-Chr5 4369702 4374140 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00147 K03671 - gmx:100499776 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00147 5 4369702 4374140 Pumo5g00147 5 4369702 4374140 ECH