Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00143 ATGGCCATGGCTATGAAGGCCACGCCAATCACGGCTTCGGGCTTTGTTTCAACAAGACCTTCCACACTTCCACCCTTCAAATCATCATTTCTCAGTTACCGCTCAGGAGCATTGGAAGTTCCTGGTATTCGGATATCCTACTCGGATAGATTTAAATGTAATAGTCATGGTGGCGGTGCCCTTGGCACTCAAATGAATCTTTTTAGCAGATTTGCTAGAGTTATCAAGTCATATGCTAATGCCCTTATAAGCTCCTTTGAAGACCCTGAGAAGATATTAGAACAAGCTGTGCTGGATATGAACAATGATTTGATAAAGGTTCGCCAAGCTACAGCACAGGTTCTAGCATCTCAAAAGCAGTTAGAAAGCAAGTACAAATCTGTACAAAAAGCTTCTGATGATTGGTATCGAAGGGCACAACTTGCTCTTCAGAAGGGAGACGAGGATCTTGCCCGTGAGGCACTTAAGAGAAGAAAGTCTTATGCCGATAATGCAACTGCTTTGAAGTTACAGCTTGATCAGCAAAAGAATGTTGCTGATGATCTTGTGTCCAAAACACAGCTTTTGGAGAGCAAGATACAGGAGGCAAAGTCAAAGAAAGATACCCTCAAAGCAAGAGCTCAGTCTGCAAAGACTTCAACCATAGTTAGTGAGATGGTAAGCAATATCAACACAAGCAGTGCCCTTGCAGCTTTTGATAAGATGGAGGAAAAGGTATTAACCATGGAAGCTCAGGCAGATGCTTTGAATCAATTGACTACTGACAATCTTGAGGGAAAGTTTGCACTGCTGGAGAACTCTTCTGTCGATGATGATCTTGCAGAGTTAAAGAAAGAACTATCTGGAAGCTCCAAGAGGGGAGAACTTCCACCAGGAAGAAGTGTTCCAACCAGTAAAGAAATTCCCTTCCTTGACTTGGAGCTTGAGAAGGAGCTTAATGAGCTCAGAAGAAGAGCAAAGGGGTACTAG 969 0.4314 MAMAMKATPITASGFVSTRPSTLPPFKSSFLSYRSGALEVPGIRISYSDRFKCNSHGGGALGTQMNLFSRFARVIKSYANALISSFEDPEKILEQAVLDMNNDLIKVRQATAQVLASQKQLESKYKSVQKASDDWYRRAQLALQKGDEDLAREALKRRKSYADNATALKLQLDQQKNVADDLVSKTQLLESKIQEAKSKKDTLKARAQSAKTSTIVSEMVSNINTSSALAAFDKMEEKVLTMEAQADALNQLTTDNLEGKFALLENSSVDDDLAELKKELSGSSKRGELPPGRSVPTSKEIPFLDLELEKELNELRRRAKGY 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00143 322 MobiDBLite consensus disorder prediction 279 300 - -
Pumo5g00143 322 PANTHER MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTIC 23 322 IPR007157 -
Pumo5g00143 322 Pfam PspA/IM30 family 66 279 IPR007157 -
Pumo5g00143 322 Coils Coil 179 213 - -
Pumo5g00143 322 Coils Coil 232 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00143 Pumo-Chr5 4340227 4345752 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00143 K03969 - gmx:100794403 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00143 5 4340227 4345752 Pumo5g00143 5 4340227 4345752 ECH