Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00137 ATGGCGGCGAGTAGAAGTGCTTTACCTCTGATCAAGTACTTGAGAGTGCGCGTCGATGCTCTTCCCCGTAACACTCCATTAACCCTCGCTCCCAACTTGTTGATTCGCCGCTTCTGCGAAGAGGTTAGGGGTTGTTTTCTCGACAAGTCCGAGGTCACAGATCGCGTCATCTCCTGCGTCAAAAACTTCCAGAAAGTCGACCCCTCCAAGGTTACGCCGAGTGCTCACTTCCAGAATGACCTAGGATTGGATAGTTTAGACACAGTAGAGATCGTGATGGCTCTTGAGGAAGAGTTTGGGTTTGAGATTCCTGACAACGAGGCTGACAAGATCAACTCAGTTAAACTTGCAGTGGACTTCATTGCATCTCATCCTCAGGCAAAGTAG 387 0.4935 MAASRSALPLIKYLRVRVDALPRNTPLTLAPNLLIRRFCEEVRGCFLDKSEVTDRVISCVKNFQKVDPSKVTPSAHFQNDLGLDSLDTVEIVMALEEEFGFEIPDNEADKINSVKLAVDFIASHPQAK 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00137 128 SUPERFAMILY ACP-like 48 124 IPR036736 -
Pumo5g00137 128 Gene3D - 42 127 IPR036736 -
Pumo5g00137 128 ProSiteProfiles Carrier protein (CP) domain profile. 50 125 IPR009081 -
Pumo5g00137 128 PANTHER ACYL CARRIER PROTEIN 1 126 IPR003231 GO:0006633
Pumo5g00137 128 Hamap Acyl carrier protein [acpP]. 51 125 IPR003231 GO:0006633
Pumo5g00137 128 ProSitePatterns Phosphopantetheine attachment site. 80 95 IPR006162 -
Pumo5g00137 128 FunFam Acyl carrier protein 39 127 - -
Pumo5g00137 128 NCBIfam acyl carrier protein 50 124 IPR003231 GO:0006633
Pumo5g00137 128 Pfam Phosphopantetheine attachment site 55 120 IPR009081 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00137 Pumo-Chr5 4302113 4303823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00137 3 128 Acyl Lipid Metabolism Gene Families AT1G65290 73.228 2.37e-61 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00137 K03955 - gmx:100305656 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00137 5 4302113 4303823 Pumo5g00137 5 4302113 4303823 ECH