Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00135 ATGCTTCTTAGGATGTACATGAGATGGGGTGAGAAACAGAAATACAAGACCAGAGTGGTTGAGAAATCACCTGGAGAAGAAGCTGGAATTAAATCTGCCACCATTGAAGTTGAAGGTCGTTATGCATATGGGTATTTGTCTGGGGAGAAAGGAACACATCGCATTGTTCGTCAATCACCTTTTAATGCCAAAGGCCTTCGTCAGACAAGCTTTTCTGGTGTTGAGGTCATGCCTCTTCTTCCAGATGAATCTATGGATGTTGAAATTCCTGAGGAGGACCTGGAAATTAGTTTTTCAAGAGCAGGTGGAAAGGGAGGTCAGAATGTGAACAAGGTTGAAACTGCAGTTCGGATTACACACATTCCAACTGGTGTCACTGTTCGCTGCACAGAGGAGAGATCCCAACTGGCGAACAAGATCAGGGCTTTAAGCCGTTTGAAAGCCAAGTTGTTGGTTATAGCCGAAGAGCAACGCGCATCAGAAATTAAGCAGATTCGGGGAGATGCAGTCAAGGCTGAATGGGGGCAACAAATACGGAACTATGTATTCCATCCGTACAAACTAGTAAAAGATGTAAGAACAGGGCATGAAACGACAGATATCACCTCTGTTATGGATGGCGAGTTGGATCCCTTCATCAAATCATACCTCAAGCACAAGTACAGTTTGTCACTGTCTACAAGTGGGGTTAACTAA 696 0.4425 MLLRMYMRWGEKQKYKTRVVEKSPGEEAGIKSATIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPDESMDVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIRALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETTDITSVMDGELDPFIKSYLKHKYSLSLSTSGVN 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00135 231 Gene3D - 80 176 - -
Pumo5g00135 231 PANTHER PEPTIDE CHAIN RELEASE FACTOR 2 1 221 - -
Pumo5g00135 231 FunFam Peptide chain release factor 2 81 176 - -
Pumo5g00135 231 SUPERFAMILY Release factor 1 221 IPR045853 -
Pumo5g00135 231 Pfam PCRF domain 1 74 IPR005139 GO:0006415
Pumo5g00135 231 Pfam RF-1 domain 84 193 IPR000352 GO:0003747|GO:0006415
Pumo5g00135 231 Gene3D - 3 214 - -
Pumo5g00135 231 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 100 116 IPR000352 GO:0003747|GO:0006415
Pumo5g00135 231 SMART PCRF_a_2 1 49 IPR005139 GO:0006415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00135 Pumo-Chr5 4293889 4295563 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00135 K02836 - gmx:100775574 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00135 5 4293889 4295563 Pumo5g00135 5 4293889 4295563 ECH