Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00133 ATGCGTTTTTGCCCATGTTTTGGATCCGAAGAAGCGAAGGGGGTAGCGGATCGCGACCCGGTCCTGCTGGTTTCGGGCATGGGTGGCTCCATTGTCAATTCCAAGCCCAAGAAATTCGGGTTCACCACTCGGGTTTGGGTCAGACTCCTCCTCGCTGATATGGAGTTCAGAAAGAAGATTTGGTCCCTTTACAATCCCCAAACAGGCTACACTGAAACTTTGGACAAGAAGTCTGAAATTGTGGTTCCTGATGATGATCACGGCCTCTATGCGATTGACATTTTGGACCCATCATGGTTTACCAAATGTATACATTTGACTGAGGTGTATCATTTTCATGACATGATTGACATGCTTGTTGGATGCGGTTACCAGAAGGGAACCACGCTGTTTGGATACGGATATGATTTCAGGCAAAGCAATAGGATTGGCAAGGTAATGGAAGGTCTTAAAAGCAAGTTGGAAACTGCTCACAAAGCTTCTGGGGGAAGAAAAGTCAATTTAATTTCGCATTCCATGGGAGGAATTATGATCTCGTGTTTCATGTCGCTTCACAGAGATGTGTTTACGAAATATGTGAATAAGTGGATTTGCTTGGCTTGCCCTTTCCAAGGAGCCCCTGGGTGCATCAATGATTCTTTATTAACTGGATTAGAGTTTGTTGATGGCTTTCAAAGCTATTTTTTTGTGAAAAGGTGGACCATGCATCAATTGCTAGTTGAGTGTCCATCAATCTATGAGATGTTGGCAAATCCATCTTATGAATGGAAAAAGCAGCCAGAAATTTTAGTTTGGCGAAAGCATACCAAAGAAGGGGACAATAATATCAATTTGGAATCTTATGGACCAACCCAAAGTATCTCTTTATTTGAAGAAGCACTGAGGCACAATGAGCTAAATTATAACGGAAAAACGATATCACTGCCTTTTAACTTTGATATCCTTGACTGGGCTGTTGAAACGCGTCAACTTATAGCTAATGCTAAACTGCCAGATGGAGTCTGCTTCTATAACATTTATGGGACATCATTGGACACGCCTTTTGATGTTTGTTATGGTTCAGAAGAATCTCCAATAGAGGACTTATCTGAAATATGCCACACAATGCCACTATATTCTTATGTCGATGGAGATGGAACAGTTCCTTCTGAATCTGCCAAGGGTGATGGACTTGCAGCCACTGCAAGGGTGGGAGTTGCTGCTTCTCACCGTGGAATATTACGAGATGAAACAGTATTTCAACATATTCAAAAATGGTTGGGTCTTGAGCCAATGGTTGGCAAGCATTCTAAAACATCAAAAGTTGCAGATGCTGATCCAATCAAGCCTATGGTTCTATGA 1341 0.4221 MRFCPCFGSEEAKGVADRDPVLLVSGMGGSIVNSKPKKFGFTTRVWVRLLLADMEFRKKIWSLYNPQTGYTETLDKKSEIVVPDDDHGLYAIDILDPSWFTKCIHLTEVYHFHDMIDMLVGCGYQKGTTLFGYGYDFRQSNRIGKVMEGLKSKLETAHKASGGRKVNLISHSMGGIMISCFMSLHRDVFTKYVNKWICLACPFQGAPGCINDSLLTGLEFVDGFQSYFFVKRWTMHQLLVECPSIYEMLANPSYEWKKQPEILVWRKHTKEGDNNINLESYGPTQSISLFEEALRHNELNYNGKTISLPFNFDILDWAVETRQLIANAKLPDGVCFYNIYGTSLDTPFDVCYGSEESPIEDLSEICHTMPLYSYVDGDGTVPSESAKGDGLAATARVGVAASHRGILRDETVFQHIQKWLGLEPMVGKHSKTSKVADADPIKPMVL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00133 446 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 13 436 - -
Pumo5g00133 446 Pfam Lecithin:cholesterol acyltransferase 63 386 IPR003386 GO:0006629|GO:0008374
Pumo5g00133 446 Gene3D alpha/beta hydrolase 76 421 IPR029058 -
Pumo5g00133 446 SUPERFAMILY alpha/beta-Hydrolases 16 387 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00133 Pumo-Chr5 4270630 4278283 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00133 4 438 Acyl Lipid Metabolism Gene Families AT3G03310 68.027 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00133 K22389 - gmx:100797043 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00133 5 4270630 4278283 Pumo5g00133 5 4270630 4278283 ECH