Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00068 ATGGGTTGCACGGCGTCGAAGCTGGAAAACGAGGACACGGTGCGGCGGTGCAAGGAGCGGCGGCGCCTCATGAAGGAGGCGGTGTACGCGCGGCACCACCTGGCCGCTGCCCACTCCGACTACTGCCGGTCCCTCCGCCTCACCGGCTCCGCCCTCTCCACCTTCGCCGCCGGCGAACCCCTCCCAGTCTCCGACCACACCCCCGCCGTCTTCCTCAACAACGCCCAACACCAACCCCCGCCACCCCAACACCACCACCACTCTCCTCCTTCACCTTCTCCGTCTCCTCCACCACCACCACCACCCTTCAACCCTTCTCCTTCCCCTCCGCCGCCGAAACTCGCCCCCACCCAACCCCGGCGCCGCAAGCCGAAGCTCCCGCACATCCTCTCCGACTCGAGCCCCTCCTCCACCCCGAGAAGCCACGTGTCAAATTTTCCCTCGAACTTCTTCCCCACCGCACATTCCACTTACTCCTCCACCCCTTCCCAAACCTCCTCCGTTTGGAACTGGGAAAATTTCTACCCTCCCCCACCCCCTCCCGCCTCCGATTACTTCCCCGAAGAACAACAAAACCAAATATTCTCACCCTCTCATTACTCTCACAAAACGCAAACACAAACACAAACACCTTCCCATTACTCTCACAAGTCACACACACCCTCCCATTACTCCCACAAAACACAACAACACACCAATCCCCAAATTCTCGACTCTGATTACGAGAGATCTGAATACGATTACTTCCACGGAAAACTCCAAACTGAGAAAACCGATTCCCACTCTCTCCACTCTCACTCTCATCATCATCTTCCGGAGGAGTACACTGAGACTGAGAGAGAAGAGGTTCAGTGTAGCGAGTGGGGGGATCATTATAGCACTACGAGTTCCTCTGATGATGATGATGATGGGGTGGAGGGGGATGTGGAATCACGCTCCGAGATCGGGACCCGCTCGAATTTCGGGTCGTCTGTGCGGGCCGAGTCGGTGCTTGGTGGCGGCGGTGGCGGTGGCGCGAAGGGCTTCAACGACACCGCGTCCTCGGTGGCGGAGATGAAGATGGTGGTGAGGCACAGGGACTTGAAGGAGATCGTGGAGGCTATTAAGGAGAATTTTGATATCGCTGCTTCCGCTGGGGATTCGGTTTCGGATATGCTCGAGATCAGTAAGGCGCAGCTTGATCGAAGCTTCAAGCAATTGAGAAAAACCGTGTACCACTCGAGTAGCATATTGAGCAACTTGAGCTCGAGTTGGACCTCGAAACCGCCGCTGGCGGTTAAGTACCGGCTCGACACCGGTTCGCTGGATCAACCAGGAGGTCAAAAGAGTCTTTGCAGCACTTTGGAACGGCTTTTGGCCTGGGAGAAGAAGCTCTACGAGGAGGTTAAGGCTAGAGAAGGTGTGAAGATTGAACATGAAAAGAAATTGTCAGCGCTTCAGACTCAGGAATACAAAGGAGAGGATGAAGCTAAGATATTCAAAACCAAGGCTTCCATAAATAGGCTGCAGTCACTAATAGCTGTTACATCTCAGGCTGTGTCTACCACCTCAACTGCCATTATTGGCCTTAGGGACTCTGATCTTGTCCCTCAGCTTGTTGAACTCATTCATGGATTCATGTACATGTGGAAAGCAATGCACTGTCACCATGAAATTCAAAGCAACATAGTGCAGCAAGTCCGTGGCCTTGTGAACCGATCATCAAGAGGTGACTCCACTTCTGAACTCCACAGGCAGGCAACCTGTGACCTTGAATCAGCTGTGACAGCTTGGCACTCCAATTTCTGCCGCCTTATAAAATTTCAGCGCGACTTCATCCTGTCCTTGCATGGCTGGTACAAGCTCAGCCTTCTTCCAGTCCACAACGATAACATCAACAACACCAGGGAGACATCTGATACATACCACTTTTTCGATGAATGGAAGCTCGCCCTTGACCGTGTCCCTGACACGGTTGCATCTGAAGCCATCAAGAGCTTCATCAATGTTGTCCGTGTGATATCTTCCAAGCAAGCGGAAGAGCTCAAGATCAAAAAACGAACCGAGACTGCATCCAAGGAACTTGAGAAAAAGGCTTCCTCTGTGAGAAACCTAGAGAGGAAATTCTACAGCTCATATTCCATGGTAGGCATTAGCCTTCCTGATACTGCACCTGACAATGGACAAGTTTTGGATGCGCGCGATCCACTTGCCGAGAAAAAACTGGAACTGGCAACCTGCCAAAGGCGCGTCGAAGATGAAATGCTGAGGCACTCAAAAGCTGTGGAGGTAACAAGAGCCATGACCCTCAACAATTTGCAAACAGGCTTGCCTGGAGTGTTTCAGGCACTGACCAGTTTCTCTTCCTTGTTCACTGAGGCTCTTCAATCAGTGTGTACCCGTTCATATGCCATCAAGTAG 2400 0.5279 MGCTASKLENEDTVRRCKERRRLMKEAVYARHHLAAAHSDYCRSLRLTGSALSTFAAGEPLPVSDHTPAVFLNNAQHQPPPPQHHHHSPPSPSPSPPPPPPPFNPSPSPPPPKLAPTQPRRRKPKLPHILSDSSPSSTPRSHVSNFPSNFFPTAHSTYSSTPSQTSSVWNWENFYPPPPPPASDYFPEEQQNQIFSPSHYSHKTQTQTQTPSHYSHKSHTPSHYSHKTQQHTNPQILDSDYERSEYDYFHGKLQTEKTDSHSLHSHSHHHLPEEYTETEREEVQCSEWGDHYSTTSSSDDDDDGVEGDVESRSEIGTRSNFGSSVRAESVLGGGGGGGAKGFNDTASSVAEMKMVVRHRDLKEIVEAIKENFDIAASAGDSVSDMLEISKAQLDRSFKQLRKTVYHSSSILSNLSSSWTSKPPLAVKYRLDTGSLDQPGGQKSLCSTLERLLAWEKKLYEEVKAREGVKIEHEKKLSALQTQEYKGEDEAKIFKTKASINRLQSLIAVTSQAVSTTSTAIIGLRDSDLVPQLVELIHGFMYMWKAMHCHHEIQSNIVQQVRGLVNRSSRGDSTSELHRQATCDLESAVTAWHSNFCRLIKFQRDFILSLHGWYKLSLLPVHNDNINNTRETSDTYHFFDEWKLALDRVPDTVASEAIKSFINVVRVISSKQAEELKIKKRTETASKELEKKASSVRNLERKFYSSYSMVGISLPDTAPDNGQVLDARDPLAEKKLELATCQRRVEDEMLRHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFTEALQSVCTRSYAIK 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00068 799 MobiDBLite consensus disorder prediction 179 233 - -
Pumo5g00068 799 MobiDBLite consensus disorder prediction 130 145 - -
Pumo5g00068 799 MobiDBLite consensus disorder prediction 186 218 - -
Pumo5g00068 799 Pfam Protein of unknown function (DUF632) 361 665 IPR006867 -
Pumo5g00068 799 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Pumo5g00068 799 MobiDBLite consensus disorder prediction 257 321 - -
Pumo5g00068 799 Coils Coil 681 701 - -
Pumo5g00068 799 MobiDBLite consensus disorder prediction 72 145 - -
Pumo5g00068 799 MobiDBLite consensus disorder prediction 82 117 - -
Pumo5g00068 799 PANTHER UNCHARACTERIZED 1 793 - -
Pumo5g00068 799 MobiDBLite consensus disorder prediction 257 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00068 Pumo-Chr5 2782666 2789277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00068 1 87 Acyl Lipid Metabolism Gene Families AT2G27090 32.000 6.31e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00068 - - gmx:100815888 1248.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00068 5 2782666 2789277 Pumo5g00068 5 2782666 2789277 ECH
Pumo7g01928 7 51248403 51254390 Pumo5g00068 5 2782666 2789277 PCT