Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00041 ATGGAATTCTTTGAAAAGGCCAAAGTGGTGCGCTTGAGGAGCCACCATGACAAATACTTGTTGGCAGATGATGACAAAGAAGGCGTTTACCAAGATCGTAATGGGACCTACAAAAATGCTAAATGGACCGTGGAGATTGTAGAGGGTGCCAACTTAATAAGATTAAAGAGTTGTTATGAAAAATACTTAACAGCCTCCAATATGCCATTTCTATTTGGTGCCACAGGGAAGAAAGTGTTGCAAACCCTTCCCACAAGATTAAATTCATCTTTGGGATGGGAACCCATAAGAGAAGGTGTGCAAGTAAGGCTTAGAACCCGTTATGGCCAATATTTGCGTGCCAATGGAGGCTTACCACCATGGAGGAACTCCATCACCCATGACATCCCACATCGAACAACAACATCAAATTGGATTCTATGGGAGGTAGATTTGGTAGAGCTCCGACCAAACCCTCCCGAACCAATAGAAAACACCATACCCAATTCTTCAATGGATTCTACTACATTGGATTCTCCTTCTCATTCTCCTACATATTCACATGATGTCTCCTTTAATATATATCTCAAGTCTCCTAAAGCACCAATTGAGAATGGAGATTCAGAGGAGAATGAGTCACCAAAGAAAGATGGAAGGATTATATTTTATAATATCAGTGATGAAAATGAGGATGTTCCTAGTACAGATGAAGAAAAATTCTTCACATTCAAAGGAAGTAGTGTGGAGGATTTAAATGAAAAGTTAAAGGAAGAAACAGGGTATGATGATATTCTTGTGTGTTGTCGCAACCCACTGACCGCAAAACTTTATCCCCTTCGTTTACAATTACCTCCTAACAATACTGACATGCACGTTGTTGTGGTTACTCCCTCCTAA 876 0.403 MEFFEKAKVVRLRSHHDKYLLADDDKEGVYQDRNGTYKNAKWTVEIVEGANLIRLKSCYEKYLTASNMPFLFGATGKKVLQTLPTRLNSSLGWEPIREGVQVRLRTRYGQYLRANGGLPPWRNSITHDIPHRTTTSNWILWEVDLVELRPNPPEPIENTIPNSSMDSTTLDSPSHSPTYSHDVSFNIYLKSPKAPIENGDSEENESPKKDGRIIFYNISDENEDVPSTDEEKFFTFKGSSVEDLNEKLKEETGYDDILVCCRNPLTAKLYPLRLQLPPNNTDMHVVVVTPS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00041 291 FunFam BnaC05g19630D protein 5 144 - -
Pumo5g00041 291 MobiDBLite consensus disorder prediction 158 178 - -
Pumo5g00041 291 MobiDBLite consensus disorder prediction 192 211 - -
Pumo5g00041 291 MobiDBLite consensus disorder prediction 196 211 - -
Pumo5g00041 291 SUPERFAMILY Actin-crosslinking proteins 6 146 IPR008999 -
Pumo5g00041 291 MobiDBLite consensus disorder prediction 153 178 - -
Pumo5g00041 291 Pfam Domain of unknown function (DUF569) 1 141 IPR007679 -
Pumo5g00041 291 Gene3D - 9 146 - -
Pumo5g00041 291 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00041 Pumo-Chr5 2357339 2359478 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00041 - - gmx:121172858 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00041 5 2357339 2359478 Pumo5g00041 5 2357339 2359478 ECH
Pumo2g02523 2 54910697 54913521 Pumo5g00041 5 2357339 2359478 PCT