Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00036 ATGGGCTCTGCGATTTCTGCCATATTCGGCGGTGGTGCCATCGACCCCTCCTCCTCTTCTTCGGAGAGTTCAAGCGTCTTGGCGTTCCACTCCTCGGAGCCCTGGCAGCAACACTTCAACGAGGTCAAAGAGACCTCTAAGCTCGTTGTGATAGATTTCACGGCGGCGTGGTGCGGCCCTTGCAGATTCATAGCTCCGTTGTTTGTCGAGATGGCAAAAAAGTTTACCAACGCTGACTTCGTCAAGATCGACGTCGACGAATTATCTGATGTGGCGAAGGAGTTTCAGGTGGAGGCGATGCCGACGTTCGTGTTGTTGAAGAAAGGGAAGGAAGTTGACAGGGTTCTGGGCGCCAACAAGGACGAGCTCGAGAAGAAGATTAAGAAACATTATCAAGCTGCTACTTAA 408 0.5172 MGSAISAIFGGGAIDPSSSSSESSSVLAFHSSEPWQQHFNEVKETSKLVVIDFTAAWCGPCRFIAPLFVEMAKKFTNADFVKIDVDELSDVAKEFQVEAMPTFVLLKKGKEVDRVLGANKDELEKKIKKHYQAAT 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00036 135 NCBIfam thioredoxin 38 130 IPR005746 GO:0015035
Pumo5g00036 135 PANTHER THIOREDOXIN 26 129 - -
Pumo5g00036 135 Gene3D Glutaredoxin 14 135 - -
Pumo5g00036 135 PRINTS Thioredoxin family signature 96 107 - -
Pumo5g00036 135 PRINTS Thioredoxin family signature 57 66 - -
Pumo5g00036 135 PRINTS Thioredoxin family signature 49 57 - -
Pumo5g00036 135 ProSiteProfiles Thioredoxin domain profile. 7 132 IPR013766 -
Pumo5g00036 135 SUPERFAMILY Thioredoxin-like 37 132 IPR036249 -
Pumo5g00036 135 FunFam Thioredoxin 25 132 - -
Pumo5g00036 135 Pfam Thioredoxin 37 129 IPR013766 -
Pumo5g00036 135 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Pumo5g00036 135 CDD TRX_family 37 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00036 Pumo-Chr5 2303076 2304554 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00036 K03671 - gmx:100803391 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00036 5 2303076 2304554 Pumo5g00036 5 2303076 2304554 ECH