Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00015 ATGAGCCCCGAAACAGCCCCGAACCTACATTTGAAGTGGAAATTCTATGCAGGCAAAGATATAACTACAACACCGGCAATCTATGATGGTACCGTTTATTTTCCAAGCTGGAATGGTAACATCTATGCAGTTAAAGAAGCGGATGGATCCCTTGTTTGGAAACAGAACTTGCAGAATCTGACAGGTCTAAATGCAACTGGTCGTGTTCGCAATGTAAATTGGACTGTGTCAAGATCAACTCCCACAGTGGTAGGGAATTTACTGATAATTGGAGTCTATGGCCCTGCTGTTGTTATTGCTGTCAAAAGAGCAACAGGTGAGCTTGTGTGGAAGACCACTTTGGATAACCATCCTGCAGCAATCATCACCATGTCTGGAACATACTATAAAAGAAGATACTATGTTGGAATATCTTCATTGGAATCAGCTGCACCCATTGAGCAATGCTGCACATTTCGTGGAAGTTTTGTAAAACTTAATGCTCAATCCGGTGCCATCTGTTGGAAGACCTATATGTTACCAGATAACAATAACACGAGAGGAGAATATGCAGGAGCTGCAATTTGGGGAAGCAGCCCTTCCATTGATGTTAAAAGAAACCATGTCTATATTGCCACTGGAAACCTCTATTCTGCCCCATTACGCGTACGTCAGTGTCGGGAGAGACAAAATAATCGAACTGAACCTACTCAGCCAGACGAGTGTGTTGAGCCAGACAACCACTCTAATTCAATCTTAGCCCTTGATTTGGATACTGGGAAGATCAAATGGTACCGCCAGTTAGGTGGCTACGATGTATATATCTCACAATGTAGAATTGCTCCAACTCCAAATTGTCCTCCACAAGGTCTCCGGCCGGATGCTGATTTTGGGGAAGCACCAATGATGTTGACCACATATATAAATCAAACCAAGAAAGATATGGTTGTTGCGGTTCAGAAAAGTGGCTATGCATGGGCTCTAGATCGGAACAATGGCAACCTCGTCTGGTCTACGGAAGCTGGGCCAGGAGGGATAGCAGGAGGTGGAACATGGGGTGCAGCAACTGATGAAAAGAGGGTTTACACTAACATTGTGAATTCTGAGGCCAAAAATTTCACTCTTGCACCGTCAAACATGATTACAACTGCTGGTGGGTGGGTGGCAATGGATGCCAGCAATGGTAGAGTTCTATGGTCGAGAGCTAACCCCAGTAACAGCACTGCTAATGGCCCTGTTAGTGTCGCAAATGAAGTTGTCTTTGCTGGATCTGTGGATAGAATGGGATCTATATTTGCAATTAATGCCAAGAATGGGAAAATTTTATGGTCCTATAAAACTGGAGGCAGTGTGTATGGAGGCATGTCAATCAGCAATGGATGCATATATGTGGGTCATGGATACAATGTTTCTGCAGGGCCTATCATGAACTCAACAGGTGGAACGTCGCTCTTTGCTATCTGTGTCTAA 1449 0.4424 MSPETAPNLHLKWKFYAGKDITTTPAIYDGTVYFPSWNGNIYAVKEADGSLVWKQNLQNLTGLNATGRVRNVNWTVSRSTPTVVGNLLIIGVYGPAVVIAVKRATGELVWKTTLDNHPAAIITMSGTYYKRRYYVGISSLESAAPIEQCCTFRGSFVKLNAQSGAICWKTYMLPDNNNTRGEYAGAAIWGSSPSIDVKRNHVYIATGNLYSAPLRVRQCRERQNNRTEPTQPDECVEPDNHSNSILALDLDTGKIKWYRQLGGYDVYISQCRIAPTPNCPPQGLRPDADFGEAPMMLTTYINQTKKDMVVAVQKSGYAWALDRNNGNLVWSTEAGPGGIAGGGTWGAATDEKRVYTNIVNSEAKNFTLAPSNMITTAGGWVAMDASNGRVLWSRANPSNSTANGPVSVANEVVFAGSVDRMGSIFAINAKNGKILWSYKTGGSVYGGMSISNGCIYVGHGYNVSAGPIMNSTGGTSLFAICV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00015 482 Pfam PQQ-like domain 320 443 IPR002372 -
Pumo5g00015 482 Pfam PQQ-like domain 22 257 IPR002372 -
Pumo5g00015 482 SMART ire1_9 365 395 IPR018391 -
Pumo5g00015 482 SMART ire1_9 405 439 IPR018391 -
Pumo5g00015 482 SMART ire1_9 81 113 IPR018391 -
Pumo5g00015 482 SMART ire1_9 25 56 IPR018391 -
Pumo5g00015 482 SMART ire1_9 193 260 IPR018391 -
Pumo5g00015 482 SMART ire1_9 303 333 IPR018391 -
Pumo5g00015 482 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 4 446 IPR011047 -
Pumo5g00015 482 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 2 482 - -
Pumo5g00015 482 Gene3D - 1 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00015 Pumo-Chr5 1324382 1335172 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00015 - - gmx:102669266 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00015 5 1324382 1335172 Pumo5g00015 5 1324382 1335172 ECH