Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00014 ATGGATGTGATTCATGGGCTTAGACAACAATCACAAGACTGGTTAAACCATGGTGGAGATTTGTTCAATAGAAGATATGCTTACAAAGAACGTATGATCAGCCCAAAAACAACACCGAACCTACATTTGAAGTGGGAATTCTATGCAGGCAAAGATATCATTGCAACACCAGCCATATATGATGGTACCCTTTATTTTCCAAGCTGGAATGGTTACATCTATGCAGTTAAAGAAGCCGATGGATCGCTTGGGCTTCAACAGCAATCACAAGACTGGTTAAACCATGGTGGAGATTTGTTCAACAGAAGGTATGCTAACAAGGAGCGTAAGATCAGCCCAAAAACAGCATCAAACCTACGTTTGAAATGGAAATTCTATGCGGGCAATGATGTCACTGCAACACCAGCGATATATGATGGTATCCTTTATTTCCCAAGCTGGAACGGTAACATCTATGCAGTTAAAGAAGTGGATGGATTGCTTGTTTCGAAGCAGAACTTGCAGAATCTGACAGATCTAAATGCAACCAGCTGTGTTCATCTTCGCAATCTAAATTGGACTGTGTGA 567 0.4109 MDVIHGLRQQSQDWLNHGGDLFNRRYAYKERMISPKTTPNLHLKWEFYAGKDIIATPAIYDGTLYFPSWNGYIYAVKEADGSLGLQQQSQDWLNHGGDLFNRRYANKERKISPKTASNLRLKWKFYAGNDVTATPAIYDGILYFPSWNGNIYAVKEVDGLLVSKQNLQNLTDLNATSCVHLRNLNWTV 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00014 188 Gene3D - 84 186 - -
Pumo5g00014 188 Gene3D - 2 83 - -
Pumo5g00014 188 Pfam PQQ-like domain 43 76 IPR002372 -
Pumo5g00014 188 Pfam PQQ-like domain 121 154 IPR002372 -
Pumo5g00014 188 SMART ire1_9 57 88 IPR018391 -
Pumo5g00014 188 SMART ire1_9 135 166 IPR018391 -
Pumo5g00014 188 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 85 178 IPR011047 -
Pumo5g00014 188 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 86 188 - -
Pumo5g00014 188 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 8 82 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00014 Pumo-Chr5 1314007 1319982 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00014 - - gmx:102669266 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00014 5 1314007 1319982 Pumo5g00014 5 1314007 1319982 ECH