Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04359 ATGTGTTCGGTCATTTGGTCATCCGAGTGTCCAGGATCTTCTCCTGATGTATCCTTGGACCAAAGTACCTTTAGATATTCGGCTATTCGGCAGTCCGAATATCCTTGGGCTATGTGTTCAGCTATTCGGCAATCCGAATACCCCCGGCCGAGTAGGAAAGAGGCGTGTTTCGTTCGAAATTCGAATCATTGGGACGTAATAGGACTTGAGATCTTTGAAGGAAATTACAACGGAACACCGTCCATTGAAGCCATTTTTGGAGAACAACGGATTGATTCAAATTTGATGGATAACAATAATTGGAGACCTAATCAAGGCACTGAAGCCAATATGGACAATAGTGATTGGAGAGGTGGACTGCAGCACGAGTCACGCCAAAGAATTGTCAACAAAATAATGGATACATTAAAAAGACATCTTCCTGTTTCTGGTCAAGAGGGATTGCATGAACTTCAGAAGATTGCTCAAAGGTTTGAAGAGAAGATTTTTACTGCTGCAACAAGCCAGTCTGATTATCTACGGAAAATATCTTTGAAGATGCTTACAATGGAGACTAAATCCCAGGGCTCCATTGCCCCCAACTTACCTCCAAAATCAAGGACTTATTATTCAACCTATTTGATGTTGGATGCTTCTTTGAAGCTTAAGAAGGCATTTGAGGAGCTTGAGTTTCAAGACGCATAG 684 0.4196 MCSVIWSSECPGSSPDVSLDQSTFRYSAIRQSEYPWAMCSAIRQSEYPRPSRKEACFVRNSNHWDVIGLEIFEGNYNGTPSIEAIFGEQRIDSNLMDNNNWRPNQGTEANMDNSDWRGGLQHESRQRIVNKIMDTLKRHLPVSGQEGLHELQKIAQRFEEKIFTAATSQSDYLRKISLKMLTMETKSQGSIAPNLPPKSRTYYSTYLMLDASLKLKKAFEELEFQDA 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04359 227 FunFam Mediator of RNA polymerase II transcription subunit 15a 115 193 - -
Pumo4g04359 227 Pfam KIX domain 114 190 IPR036546 -
Pumo4g04359 227 SUPERFAMILY Kix domain of CBP (creb binding protein) 114 186 IPR036529 GO:0003712|GO:0006355
Pumo4g04359 227 Gene3D Coactivator CBP, KIX domain 115 192 IPR036529 GO:0003712|GO:0006355
Pumo4g04359 227 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 112 193 IPR044661 GO:0003713|GO:0031490
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04359 Pumo-Chr4 84610688 84615869 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04359 K14972 - gmx:100783762 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04359 4 84610688 84615869 Pumo4g04357 4 84572934 84577813 PCT