Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04333 ATGACCCTTTGTATGGCTTCTGGCGCTGCTGAGGAAAACATGAACGAGGTGGTCGAAGATGGATATGTGTTCAAAGAAGAGATCCATCTCACGGTGCTCAAAACTTCTCTGTTCTTCGCGGGTGATGGCTTCACCGTATACGATTGCAAGGGTCAACTCGTGTTCAGGGTTGACTCTTATGGACCCGACACTCGCGACAGAGACGAACTCGTTCTCATGGATCCTAACGGACGTTGTCTCCTCACCGTTCGTCGAAAGAGGCCGAGTTTGCATCAACGGTGGGAAGGCTTCAAAGGGGAGAGGATGGACGGTGATAAACCTATCTTCAGCGTGAAGAGAGCGTCGATCATAGGACGGTCGCGTGCGAGTTTGACGGTGGAGATGTACGATAACCCGGGTGAGGAGTACCAGATCGAAGGGTGCTTCTCGCAGCGTTGCTGCACGGTTTTCAATGTGATGAAGGAATCGGTGGCTGAGATTCGTCGTAAAGTGGACCCCACCACCAGCGTCGTGCTTGGGAAGGAAGTGTTCTCCCTTTGCGTTAAGCCTGGTTTTGATGCGGCTTTTGCCATGGGGTTTGTGCTTGTCCTAGATCAAATCAGCGGTGAGGATTATGTTGATAATAGTGCGACCGCGGAGCCTACGGTGTACCCTGCCACAGAAGATTAA 669 0.5187 MTLCMASGAAEENMNEVVEDGYVFKEEIHLTVLKTSLFFAGDGFTVYDCKGQLVFRVDSYGPDTRDRDELVLMDPNGRCLLTVRRKRPSLHQRWEGFKGERMDGDKPIFSVKRASIIGRSRASLTVEMYDNPGEEYQIEGCFSQRCCTVFNVMKESVAEIRRKVDPTTSVVLGKEVFSLCVKPGFDAAFAMGFVLVLDQISGEDYVDNSATAEPTVYPATED 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04333 222 SUPERFAMILY Tubby C-terminal domain-like 17 200 IPR025659 -
Pumo4g04333 222 Gene3D - 15 205 IPR038595 -
Pumo4g04333 222 Pfam LURP-one-related 17 196 IPR007612 -
Pumo4g04333 222 PANTHER - 29 201 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04333 Pumo-Chr4 84311865 84313356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04333 - - gmx:100527456 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04333 4 84311865 84313356 Pumo4g04333 4 84311865 84313356 ECH
Pumo4g04333 4 84311865 84313356 Pumo7g00147 7 1759741 1761353 PCT