Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04307 ATGGAAGGCATAACGGAGGGAGTGAACAACATCAACATCTCCGATTCGTATAAGAAGAATCGAATTCAGGTCTCTAACACCAAGAAGCCCCTCTTCTTCTACGTTAATCTTGCCAAGAGATATATGCAACAGCATAATGAGGTCGAGCTCTCAGCACTAGGAATGGCTATTGCCACAGTGGTAACTGTTGCCGAAATTTTGAAAAACAATCAACTTGCTGTTGAAAAGAAAATCATGACATCAACTGTTGACATAAAGGATGATTCTAGAGGTAGACCTGTCCAAAAGGCCAAGATTGAAATAGTACTTGGGAAGACAGCAAACTTCGATGAGTTGATGGCTGCTGCGGCTGCTGAAGACGGTGAAAATGGAGATGTTGAAGAGCAAAGCGCATGA 396 0.4268 MEGITEGVNNINISDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNQLAVEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTANFDELMAAAAAEDGENGDVEEQSA 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04307 131 Pfam Alba 20 75 IPR002775 GO:0003676
Pumo4g04307 131 PIRSF UCP030333_Alba 1 131 IPR014560 -
Pumo4g04307 131 FunFam Uncharacterized protein At2g34160 18 130 - -
Pumo4g04307 131 SUPERFAMILY AlbA-like 19 114 IPR036882 GO:0003676
Pumo4g04307 131 Gene3D - 18 129 IPR036882 GO:0003676
Pumo4g04307 131 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 122 IPR014560 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04307 Pumo-Chr4 84106690 84109473 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04307 - - gmx:100527472 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04307 4 84106690 84109473 Pumo4g04307 4 84106690 84109473 ECH
Pumo4g04307 4 84106690 84109473 Pumo7g00163 7 1864008 1866859 PCT