Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04291 ATGAGCAGGGCGGGAGACTGGAAGTGCAGGTCATGCCAGCATCTCAACTTTCAGAGGCGCGAGTGTTGCCAACGATGCGGAGATTCAAATCCAAAAAGTGGATCTTCACTTGGTGTTCGCCCAGGTGACTGGTACTGTGCTGCACATAACTTTGCTAGTCGTTCAAGCTGCTTCAAGTGTGGTGCTTTCAACAATGACTCAAGACCCTCTGGGACTGGGAGACCTGCATGGAAATCTGGTGATTGGATATGCAACAGATCGGGATGCAATGAACACAACTTTGCTAGCAGAGTGGAATGTTTTAAATGCTGTGCTCCAAGGGACTCCCACTAG 333 0.4955 MSRAGDWKCRSCQHLNFQRRECCQRCGDSNPKSGSSLGVRPGDWYCAAHNFASRSSCFKCGAFNNDSRPSGTGRPAWKSGDWICNRSGCNEHNFASRVECFKCCAPRDSH 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04291 110 SMART zf_4 80 106 IPR001876 -
Pumo4g04291 110 SMART zf_4 5 29 IPR001876 -
Pumo4g04291 110 SMART zf_4 42 63 IPR001876 -
Pumo4g04291 110 SUPERFAMILY Ran binding protein zinc finger-like 71 109 IPR036443 -
Pumo4g04291 110 SUPERFAMILY Ran binding protein zinc finger-like 33 65 IPR036443 -
Pumo4g04291 110 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Pumo4g04291 110 FunFam Ran-binding zinc finger protein 71 109 - -
Pumo4g04291 110 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Pumo4g04291 110 ProSitePatterns Zinc finger RanBP2-type signature. 82 103 IPR001876 -
Pumo4g04291 110 Gene3D - 2 32 - -
Pumo4g04291 110 Gene3D - 72 109 - -
Pumo4g04291 110 Gene3D - 33 66 - -
Pumo4g04291 110 PANTHER ZINC FINGER PROTEIN 39 109 - -
Pumo4g04291 110 ProSiteProfiles Zinc finger RanBP2 type profile. 78 109 IPR001876 -
Pumo4g04291 110 Pfam Zn-finger in Ran binding protein and others 78 107 IPR001876 -
Pumo4g04291 110 SUPERFAMILY Ran binding protein zinc finger-like 2 32 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04291 Pumo-Chr4 83935619 83936577 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04291 - - vun:114186133 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04291 4 83935619 83936577 Pumo4g04291 4 83935619 83936577 ECH